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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35..1048)
DNA (1014bp) protein (338aa)
methyltransferase n=1 Tax=Lamprocystis purpurea RepID=UPI0003708C8B
methyltransferase n=1 Tax=Lamprocystis purpurea RepID=UPI0003708C8B
DNA methylase N-4/N-6 domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
DNA methylase N-4/N-6 domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1144..2169)
DNA (1026bp) protein (342aa)
membrane protein n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B42159
membrane protein n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B42159
integral membrane protein terc; K05794 tellurite resistance protein TerC Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
integral membrane protein terc; K05794 tellurite resistance protein TerC Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2325..2834)
DNA (510bp) protein (170aa)
Conserved uncharacterized protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NMF1_DESTT
Conserved uncharacterized protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NMF1_DESTT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3066..3863)
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N6G6_9GAMM
Putative uncharacterized protein n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N6G6_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4102..4425)
DNA (324bp) protein (108aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4483..5433)
DNA (951bp) protein (317aa)
CbbX protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1B9_NITHN
CbbX protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1B9_NITHN
CbbX protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
CbbX protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5515..5949)
DNA (435bp) protein (145aa)
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01602 ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01602 ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ribulose-bisphosphate carboxylase (EC:4.1.1.39)
ribulose-bisphosphate carboxylase (EC:4.1.1.39)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5968..7455)
DNA (1488bp) protein (496aa)
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ribulose-bisphosphate carboxylase (EC:4.1.1.39)
ribulose-bisphosphate carboxylase (EC:4.1.1.39)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7591..8514
DNA (924bp) protein (308aa)
Transcriptional regulator, LysR family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB77_NITMU
Transcriptional regulator, LysR family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB77_NITMU
LysR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
LysR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8598..9005)
DNA (408bp) protein (136aa)
Hydrolase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GP41_THISH
Hydrolase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GP41_THISH
hydrolase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hydrolase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9022..9615)
DNA (594bp) protein (198aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Putative uncharacterized protein id=1957529 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Putative uncharacterized protein id=1957529 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9608..9844)
DNA (237bp) protein (79aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10463..10705)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RYR0_SYNP3
Uncharacterized protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RYR0_SYNP3
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11112..12176)
DNA (1065bp) protein (355aa)
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype n=1 Tax=Thiocapsa marina 5811 RepID=F9U817_9GAMM
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype n=1 Tax=Thiocapsa marina 5811 RepID=F9U817_9GAMM
fructose-bisphosphate aldolase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
fructose-bisphosphate aldolase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12228..13667)
DNA (1440bp) protein (480aa)
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pyruvate kinase (EC:2.7.1.40)
pyruvate kinase (EC:2.7.1.40)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13790..14971)
DNA (1182bp) protein (394aa)
phosphoglycerate kinase (EC:2.7.2.3) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
phosphoglycerate kinase (EC:2.7.2.3) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
phosphoglycerate kinase (EC:2.7.2.3)
phosphoglycerate kinase (EC:2.7.2.3)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15148..16146)
DNA (999bp) protein (333aa)
cbbG; glyceraldehyde-3-phosphate dehydrogenase CbbG (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
cbbG; glyceraldehyde-3-phosphate dehydrogenase CbbG (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
cbbG; glyceraldehyde-3-phosphate dehydrogenase CbbG (EC:1.2.1.12)
cbbG; glyceraldehyde-3-phosphate dehydrogenase CbbG (EC:1.2.1.12)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16288..18327)
DNA (2040bp) protein (680aa)
tkt; transketolase; K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
tkt; transketolase; K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
transketolase n=1 Tax=Methylomicrobium buryatense RepID=UPI00034CA9B0
transketolase n=1 Tax=Methylomicrobium buryatense RepID=UPI00034CA9B0
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18622..19440)
DNA (819bp) protein (273aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
inositol monophosphatase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036CDA80
inositol monophosphatase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036CDA80
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19437..19850)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B5M9_9PROT
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B5M9_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19952..20512)
DNA (561bp) protein (187aa)
AhpC/TSA family related to alkyl hydroperoxide reductase and thiol specific antioxidant n=2 Tax=sulfur-oxidizing symbionts RepID=G2DGK2_9GAMM
AhpC/TSA family related to alkyl hydroperoxide reductase and thiol specific antioxidant n=2 Tax=sulfur-oxidizing symbionts RepID=G2DGK2_9GAMM
peroxiredoxin Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
peroxiredoxin Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20678..22039
DNA (1362bp) protein (454aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase; K00833 adenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
adenosylmethionine-8-amino-7-oxononanoate aminotransferase; K00833 adenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003645177
adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003645177
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_23
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22114..22575)
DNA (462bp) protein (154aa)
chemotaxis protein CheW n=1 Tax=Dyella japonica RepID=UPI0002DF84B3
chemotaxis protein CheW n=1 Tax=Dyella japonica RepID=UPI0002DF84B3
CheW domain-containing protein; K06598 chemosensory pili system protein ChpC Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
CheW domain-containing protein; K06598 chemosensory pili system protein ChpC Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_24
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22575..23018)
DNA (444bp) protein (148aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2096_25
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23047..28587)
DNA (5541bp) protein (1847aa)
CheA signal transduction histidine kinase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G1W4_9GAMM
CheA signal transduction histidine kinase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G1W4_9GAMM
CheA signal transduction histidine kinase; K02487 type IV pili sensor histidine kinase and response regulator; K06596 chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
CheA signal transduction histidine kinase; K02487 type IV pili sensor histidine kinase and response regulator; K06596 chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
Displaying 25 items

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