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RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_1
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..526)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Rhodobacter capsulatus B6 RepID=V8HE17_RHOCA
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_2
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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853..2112
DNA (1260bp) protein (420aa)
putative DNA methyltransferase (EC:2.1.1.-) Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
putative DNA methyltransferase (EC:2.1.1.-)
DNA methylase n=1 Tax=Loktanella vestfoldensis RepID=UPI00035C38B0
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_3
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2109..2744
DNA (636bp) protein (212aa)
ParB domain protein nuclease n=1 Tax=Rhodobacter sp. SW2 RepID=C8S4N1_9RHOB
DNA modification methylase Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
DNA modification methylase
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_4
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2839..3048)
DNA (210bp) protein (70aa)
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_5
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3101..3646
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Loktanella vestfoldensis RepID=UPI00036CBBF7
phage cell wall peptidase, NlpC/P60 family Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
phage cell wall peptidase, NlpC/P60 family
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_6
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3670..4629
DNA (960bp) protein (320aa)
gene transfer agent (GTA) n=1 Tax=Loktanella vestfoldensis RepID=UPI000364D211
gene transfer agent (GTA) like protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_7
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4439..5158)
DNA (720bp) protein (240aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T7K5_MESCW
polar amino acid ABC transporter inner membrane subunit; K10019 octopine/nopaline transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
polar amino acid ABC transporter inner membrane subunit
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_8
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5162..5869)
DNA (708bp) protein (236aa)
Nopaline transport system permease protein NocQ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CA24_9RHIZ
polar amino acid ABC transporter inner membrane subunit; K10020 octopine/nopaline transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
polar amino acid ABC transporter inner membrane subunit
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_9
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5945..6739)
DNA (795bp) protein (265aa)
Extracellular solute-binding protein family 3 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T7K7_MESCW
family 3 extracellular solute-binding protein; K10018 octopine/nopaline transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
family 3 extracellular solute-binding protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_10
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6828..8780)
DNA (1953bp) protein (651aa)
ABC transporter related protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T7K8_MESCW
ABC transporter Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
ABC transporter
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_11
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8777..10183)
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036172D4
FAD linked oxidase Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
FAD linked oxidase
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_12
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10186..11328)
DNA (1143bp) protein (381aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Histidinol-phosphate aminotransferase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T7L0_MESCW
histidinol-phosphate aminotransferase
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_13
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11328..12446)
DNA (1119bp) protein (373aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T7L1_MESCW
oxidoreductase FAD/NAD(P)-binding domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
oxidoreductase FAD/NAD(P)-binding domain-containing protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_14
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12443..13480)
DNA (1038bp) protein (346aa)
Rieske (2Fe-2S) iron-sulfur domain; K03862 vanillate monooxygenase [EC:1.14.13.82] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
(2Fe-2S)-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037376EE
Rieske (2Fe-2S) iron-sulfur domain
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_15
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13592..14527
DNA (936bp) protein (312aa)
LysR substrate-binding protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T7L3_MESCW
LysR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
LysR family transcriptional regulator
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_16
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14555..15115)
DNA (561bp) protein (187aa)
gfa3; glutathione-dependent formaldehyde-activating enzyme Gfa (EC:4.4.1.22) Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
gfa3; glutathione-dependent formaldehyde-activating enzyme Gfa (EC:4.4.1.22)
Glutathione-dependent formaldehyde-activating enzyme n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XDJ3_RHIFR
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_17
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15176..16306)
DNA (1131bp) protein (377aa)
alcohol dehydrogenase class-3; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ACF9_9BACT
alcohol dehydrogenase class-3
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_18
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16383..18065)
DNA (1683bp) protein (561aa)
hutU; urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hutU; urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S0V4_9RHOB
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_19
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18058..18882)
DNA (825bp) protein (275aa)
hutG; N-formylglutamate amidohydrolase (EC:3.5.1.68); K01458 N-formylglutamate deformylase [EC:3.5.1.68] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hutG; N-formylglutamate amidohydrolase (EC:3.5.1.68)
N-formylglutamate amidohydrolase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LRD7_RUEPO
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_20
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18879..20417)
DNA (1539bp) protein (513aa)
hutH; histidine ammonia-lyase (EC:4.3.1.3); K01745 histidine ammonia-lyase [EC:4.3.1.3] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hutH; histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=HUTH_RUEPO
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_21
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20414..21580)
DNA (1167bp) protein (389aa)
hutI; imidazolonepropionase (EC:3.5.2.7); K01468 imidazolonepropionase [EC:3.5.2.7] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hutI; imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=2 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=HUTI_RUEPO
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_22
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21708..23066
DNA (1359bp) protein (453aa)
Formiminoglutamate deiminase n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BF39_9RHOB
N-formimino-L-glutamate deiminase Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
N-formimino-L-glutamate deiminase
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_23
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23073..23732)
DNA (660bp) protein (220aa)
UPI0003D1A709 related cluster n=1 Tax=unknown RepID=UPI0003D1A709
hypothetical protein; K09975 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_24
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23836..24396
DNA (561bp) protein (187aa)
hutC; histidine utilization repressor; K05836 GntR family transcriptional regulator, histidine utilization repressor Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Histidine utilization repressor id=2514685 bin=GWF1_Rhodobacteraceae_65_7 species=Roseovarius nubinhibens genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
GntR family transcriptional regulator
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2591_25
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24640..25134)
DNA (495bp) protein (165aa)
ABC-2 type transporter n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KAL6_NITWC
ABC-2 type transporter; K09686 antibiotic transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
ABC-2 type transporter
Displaying 25 items

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