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RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35

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Displaying items 1-30 of 297 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_1
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..340)
DNA (339bp) protein (113aa)
ISPsy20 transposase IstB n=1 Tax=uncultured bacterium RepID=C6L0X2_9BACT
putative IS21 family transposase, OrfB Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
istB; ISPsy20, transposase IstB
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_2
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(330..617)
DNA (288bp) protein (96aa)
ISPsy20 transposase IstA n=1 Tax=uncultured bacterium RepID=C6L0X3_9BACT
istA; IS21 family transposase Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
istA; ISPsy20, transposase IstA
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_3
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(721..1332)
DNA (612bp) protein (204aa)
Integrase, catalytic region n=2 Tax=Rhizobium RepID=N6U3F9_9RHIZ
putative IS21 family transposase, OrfA Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
putative IS21 family transposase, OrfA
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_4
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1372..1974)
DNA (603bp) protein (201aa)
ISPsy20 transposase/integrase IstA n=1 Tax=uncultured bacterium RepID=C6L0X4_9BACT
putative IS21 family transposase, OrfA Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
istA; ISPsy20, transposase IstA
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_5
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2187..4178)
DNA (1992bp) protein (664aa)
UPI0003CE3D68 related cluster n=1 Tax=unknown RepID=UPI0003CE3D68
Fis family GAF modulated sigma54 specific transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Fis family GAF modulated sigma54 specific transcriptional regulator
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_6
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4277..4753)
DNA (477bp) protein (159aa)
UPI0003D1AB70 related cluster n=1 Tax=unknown RepID=UPI0003D1AB70
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_7
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4892..5098)
DNA (207bp) protein (69aa)
UPI0003D6AB6F related cluster n=1 Tax=unknown RepID=UPI0003D6AB6F
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_8
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5122..6228)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2J5R7_9RHOB
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_9
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6242..6565)
DNA (324bp) protein (108aa)
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_10
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6936..8603
DNA (1668bp) protein (556aa)
monooxygenase subunit alpha; K08684 methane monooxygenase [EC:1.14.13.25] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Methane/Phenol/Toluene Hydroxylase (EC:1.14.13.25)
UPI0003CEF8AD related cluster n=2 Tax=unknown RepID=UPI0003CEF8AD
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_11
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8705..9769
DNA (1065bp) protein (355aa)
Oxidoreductase FAD/NAD(P)-binding subunit n=1 Tax=Acidiphilium sp. PM RepID=F7S2W6_9PROT
oxidoreductase FAD/NAD(P)-binding subunit Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
oxidoreductase FAD/NAD(P)-binding subunit
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_12
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9808..10866
DNA (1059bp) protein (353aa)
UPI0003CF7361 related cluster n=1 Tax=unknown RepID=UPI0003CF7361
prmC; putative propane monooxygenase hydroxylase small subunit Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
methane/phenol/toluene hydroxylase
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_13
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10878..11246
DNA (369bp) protein (123aa)
Monooxygenase component MmoB/DmpM n=5 Tax=Rhodobacter RepID=A3PJU9_RHOS1
monooxygenase component MmoB/DmpM Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Monooxygenase component MmoB/DmpM
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_14
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11307..12332
DNA (1026bp) protein (342aa)
UPI0003CF4102 related cluster n=1 Tax=unknown RepID=UPI0003CF4102
hypothetical protein; K07045 Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
putative metal-dependent hydrolase of the TIM-barrel fold protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_15
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12338..13147
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JIE1_9RHOB
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_16
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13196..14827
DNA (1632bp) protein (544aa)
UPI0003CEC53A related cluster n=1 Tax=unknown RepID=UPI0003CEC53A
groL; 60 kDa chaperonin; K04077 chaperonin GroEL Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
groL; 60 kDa chaperonin
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_17
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14863..15906
DNA (1044bp) protein (348aa)
Zinc-containing alcohol dehydrogenase (EC:1.1.1.1); K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Putative Zinc-containing alcohol dehydrogenase (EC:1.1.1.1)
UPI0003CE6B18 related cluster n=1 Tax=unknown RepID=UPI0003CE6B18
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_18
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16034..16687
DNA (654bp) protein (218aa)
MIP family channel proteins n=3 Tax=Rhodobacter sphaeroides RepID=B9KSE1_RHOSK
MIP family channel protein; K06188 aquaporin Z Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
aqpZ; aquaporin z, Major Intrinsic Protein (MIP) Family
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_19
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16866..17261
DNA (396bp) protein (132aa)
hypothetical protein; K01759 lactoylglutathione lyase [EC:4.4.1.5] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Lactoylglutathione lyase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EHH6_9RHOB
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_20
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17385..18443)
DNA (1059bp) protein (353aa)
periplasmic protein TorT (EC:3.6.3.17) Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
periplasmic protein TorT (EC:3.6.3.17)
TMAO reductase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EMD5_9RHOB
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_21
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18501..21383
DNA (2883bp) protein (961aa)
two-component system, sensor histidine kinase TorS (EC:2.7.13.3) Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
two-component system, sensor histidine kinase TorS (EC:2.7.13.3) rbh
Two-component system, sensor histidine kinase TorS n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XUC9_PARAH
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_22
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21364..22068)
DNA (705bp) protein (235aa)
Chemotaxis protein CheY n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EMM2_9RHOB
transcriptional regulatory protein TorR Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
transcriptional regulatory protein TorR
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_23
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22245..23189
DNA (945bp) protein (315aa)
glycine/betaine ABC transporter substrate-binding protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00037D2C20
glycine betaine-binding periplasmic protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
glycine betaine-binding periplasmic protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_24
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23266..24279
DNA (1014bp) protein (338aa)
Glycine betaine/proline ABC transporter, ATP-binding protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E2E1_9RHOB
glycine betaine/proline ABC transporter Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
glycine betaine/proline ABC transporter
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_25
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24279..26210
DNA (1932bp) protein (644aa)
ABC transporter permease n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002D66D67
glycine betaine/L-proline transport system, permease protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
glycine/betaine ABC transporter permease
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_26
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26740..29337
DNA (2598bp) protein (866aa)
ATPase E1-E2 type (EC:3.6.1.-); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
P-type HAD superfamily ATPase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6N3_9RHIZ
ATPase E1-E2 type
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_27
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29659..35049
DNA (5391bp) protein (1797aa)
Outer membrane autotransporter barrel n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GY83_METFK
Outer membrane autotransporter barrel Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Outer membrane autotransporter barrel
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_28
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35061..35177
DNA (117bp) protein (39aa)
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_29
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35437..35979
DNA (543bp) protein (181aa)
Transcriptional regulator, LuxR family protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X8K4_9RHOB
transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
transcriptional regulator
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_35_30
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36402..37301
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI0003654889
PKD domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
Displaying items 1-30 of 297 in total

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