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RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_335_44

Organism: Rhodobacterales bacterium RIFCSPHIGHO2_12_FULL_62_75

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(42267..44111)

Top 3 Functional Annotations

Value Algorithm Source
transport secretion system IV, VirD4 protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 614.0
  • Bit_score: 1213
  • Evalue 0.0
Type IV secretion system coupling protein id=2433486 bin=GWF1_Rhodobacteraceae_65_7 species=Roseovarius sp. 217 genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 618.0
  • Bit_score: 1003
  • Evalue 1.10e-289
Type IV secretory pathway, VirD4 component similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 634.0
  • Bit_score: 801
  • Evalue 1.40e-229

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Taxonomy

RHI_Rhodobacterales_62_75 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1845
ATGCTTTCGAACCTCGACACCGCATGGCGGTATCCGCTGGCGCTGCTCCTTGGCCTGCTGACCGGCCTCTACATCGGCGGCATGCTGGCGACGATCTATGTGATTACTGCCTTCCGGGAGAGCCTCGATACGCTTAGCCCTATGGGCCCCTGGTTCCTGCGCTATGCCTGGGCCGACCTCGCCGCCCGGCCATCGGTTCTGCAGGGTGCGCTGATCATCACAGGTGCCGTGACTGTCGCCTTGACGCTGGTTGGTCTGGCCGGGGTCCATCGCGGCCGTCTCAACCAGTATGACGATGCGCATTTCCAGTCACGCCGCGAGTTGAAGCGCAACCGCATGGTCGGAACCCACGATCAGAACGGCTTCCTCTTCGGCAAGCTCGGCCTCCCGAATTCCGATGCGCCCTTTGTGATGGCGCCGCCGGACCGCTTCCCGCACGCGATGATGATCGCGCCGACCGGCCGCGGGAAAGGCGTCGGCTTCGTCATCCCGAACCTCCTCCACTTCTCGGGCTCGGCGATCATCCTCGACGTGAAGGGCGAGAACTTCGCCAAGACCTCCATCCATCGCAAGCACGGGCTCAAGAACGGTATCTGGTACTTCTCGCCCTTCGACGAAGATCGGGGGTCGCACCGCTTCAACCCCCTCGCACGGATCGCCGCCCTGCCCTCCGCCGAGCGTCAGTACACCGCGCTGAACTCGATGGCCGACCTCTTCCTCATCCCGGAAGGCGAAAGCGCCCAGAGCTTCTTCAACGCGGGCAAGCGGCTCTTCATCGCCTCATGCCTCTACGCCATTGAACAGCGCCGCCCGACTTTGGGCTTTGCCGGTGAAATCATGGCTGGTGGCGGTGACAAGAAGAAGAGCTACACGGCCATTGCCGAGACCACGAACATCCCGATCGTCTCCCGCACGTTTCTCGAAATGGCCGACGTCCCGGAAAAGACCCTCGGGGCTTATGTGTCGGTCATCCAAGGCTCCGGTCTCGAGCTTTGGAACGACCCGGCGGTAGACCGCGTGACCTCGGCCAGCGACTTCGACTTCTCAACCTTCCGCCGCGACCCCCAAAGCCTCTACATCGTCGTCCAGCCCGAGCACCTGAAAACCCTGGCCCCCCTCGTCCGTCTGCTCTTCGCGGATGCCATCGCCTCGCTGCAGCGCAGGGAGCCGGGGCATGATGAACCCCATGCTGTCATGTTCCTGATGGACGAGTTCGACCAGCTTGGCCGTCAGCCGCTTGTCCTCTCTTCCATCAAGACCATTCGCAGCTTCGGCGGCCGGTTCTTCATCATCTCCCAAACCATTCCTGGCCTCGATGACATCTATGGCGAAACTGGGCGGAGGTCCCTGCAGGGCGGGGCCGGTGTGCAGATTTATATGACGCCGCAGGATGACCGGACCGCCGAGGTCCTCTCGAATGCCTTGGGCCGATCCACCATCACCGCCGTGACCGAAAGCCAGTCGCGGGTTCGGGCGCTCGAAGATAGCGCGAACGTCAGCAGGCGTTCCGAGGAGCGGCCGTTGATTTCGGCGAACGAGGTGCTGCGGTTTCCGCTGGATGAGGTGCTGGTGCTGCCCGAGGGACAGTATCCGATCCGGGCGCGACACATCCGATACTATGAGGATCGGCACTTTGGTCCGATTGATCGAGCACGGAAGGGGAAGGCGCTGCCGACAATACAAACGGGCGGGGCGGATAGCAGGCTTGCGCCTGTCGGAAAGCTGTCAGGGTTGGCTGCGTCCGCCGGACAGGCAGATGCCGAGGTCTTCGGAGAAGCGGCACGGGTGTTTCAGGAAATTGCGAAGAGCGCCAAGCGCAGAAGGAAGGTGCCCGCTCGGGTCTGA
PROTEIN sequence
Length: 615
MLSNLDTAWRYPLALLLGLLTGLYIGGMLATIYVITAFRESLDTLSPMGPWFLRYAWADLAARPSVLQGALIITGAVTVALTLVGLAGVHRGRLNQYDDAHFQSRRELKRNRMVGTHDQNGFLFGKLGLPNSDAPFVMAPPDRFPHAMMIAPTGRGKGVGFVIPNLLHFSGSAIILDVKGENFAKTSIHRKHGLKNGIWYFSPFDEDRGSHRFNPLARIAALPSAERQYTALNSMADLFLIPEGESAQSFFNAGKRLFIASCLYAIEQRRPTLGFAGEIMAGGGDKKKSYTAIAETTNIPIVSRTFLEMADVPEKTLGAYVSVIQGSGLELWNDPAVDRVTSASDFDFSTFRRDPQSLYIVVQPEHLKTLAPLVRLLFADAIASLQRREPGHDEPHAVMFLMDEFDQLGRQPLVLSSIKTIRSFGGRFFIISQTIPGLDDIYGETGRRSLQGGAGVQIYMTPQDDRTAEVLSNALGRSTITAVTESQSRVRALEDSANVSRRSEERPLISANEVLRFPLDEVLVLPEGQYPIRARHIRYYEDRHFGPIDRARKGKALPTIQTGGADSRLAPVGKLSGLAASAGQADAEVFGEAARVFQEIAKSAKRRRKVPARV*