ggKbase home page

RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_335_45

Organism: Rhodobacterales bacterium RIFCSPHIGHO2_12_FULL_62_75

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(44122..45999)

Top 3 Functional Annotations

Value Algorithm Source
virD2; VirD2 protein (EC:3.1.-.-); K01175 [EC:3.1.-.-] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 625.0
  • Bit_score: 1234
  • Evalue 0.0
T-DNA border endonuclease id=2433489 bin=GWF1_Rhodobacteraceae_65_7 species=Roseovarius sp. 217 genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 623.0
  • Bit_score: 830
  • Evalue 1.30e-237
Relaxase/mobilization nuclease domain protein similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 649.0
  • Bit_score: 380
  • Evalue 1.00e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Rhodobacterales_62_75 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1878
ATGACCCGGTCACCTTCCGTCGAGGATCTGGTTCTCGGTCATGTTCTCGACGACCGTCGTCGTGGGCGGGGCGGTGGCGACGGCTCATCGTCCCGGCTCGGAACCAGGAAAGAACGTCAGACTCGGGCGCTTCTGCGCAACGCGAGTGGGCCACGCGGCTGGCAGTCGGTCGTCAAACGCATCGCTGGTGGGAGTGCCCGCACCCCGCAGGAGCTGAAGCGCCTTCTCGACTATGTGGCCCGGGAAGAGGGGGTGCAGAGCACCTGGTGCAATCTGGCGGGCTACGAGCGTGACTTTGATCCTGCGCGAACGGAGCGGACGGCGGACACCTGGTCCTCGACCTGGATAGGTGCGCCACGCCGGGGACACGCCGATCATATCGTTCTGAGTTTTCCGCGGGGGGTGGACGCCGAGCACGCTGAGGTGATCGCCCGGGAATGGGGTCAGGCCGTGTTCGGGTCCGGTGAGTATGGGGATGCTTGGCGCTATGTCGCTGCCCTTCACAAGGACACCGACCATCTGCATGCGCATTTCGTGGTCGACAAGCATGGCATCGAGGAAGGCCGCTTCCTATCGATCTGTCGCCATGCCGCGCTGAACTTCGATGTGATGCGTGAACTTCACGCCGAGATCAGCCAGTCGCATGGGCTGAACATCCTCGCCTCGTCGCGCCTTTCCCGCGGCATCATCGAGAACCCGCCGCGCCAGTCCGAGCTGCGTGCGTCGCGAGAGGGCGGCAAGGCCACGCCCCCTGCCCCGCCGCCGCTTTCCGATGGGGAGCGGAGCCGACGGCTCGCCGCGATGCAGGGCTTTGCTCGCGAATACGAAACCTTGGGTGACCTTGCTGGTCTTGCCGCTACAACCGGCGCCGAGGCGGGCACCTCTTCCTACCTTTCCCGGCTGGCCCGAGCGCTTGGCGCTTCTGCCGCCGCTCTCAGACAAGGAGTTCCCCTGATGCCCGATCACTCGCTTCATGCCGAAGGGGATCCCGCCGCACGGGTTGAGGCTGCGCGCAGCGAGATGATCGCTTCGGCCACCGAAGCTTGGGAGGCGATCCGTGCCATGGAACCCTCGGCCGAGCGGGTCGATCTTGAACGAAGCTTTGCCGAGCAGGCGCGCGCCTCGCTGAAACTCGCACCAGAAAGCGTCCTCCTGGCAGAGCATGCGCAGGTTGCTGATCGGAACACCGATCCCTATCACAATCCGACCCTCGCCTCGCTGGCGCGGCTGGAGCAGGGCCAGACCGAGGGGGTTACCCTCGATGAAGGTCTACGCACGACCCTTGCACATGTTCGCGACGAGATCGGCGAACGGCTGACGGCGCTGTTCTCGATCCGGGAAGATGAGCTTCGCATAGCCGGCACGTCCGTCGAGGAAATGGTCGCCCGCTTCAGTTTGGCCGATCGCAGCGAAGGTCAGCGGGCAAGCTGGATCACTGAACAGCCGAACACGATGCAAAAGGTGTTCTGGATGGAAACGGAGCGCGCCCTAGGTGAGGAAGTTCGCGCAGAAGTCGCCTCCTTCAACCTCGCGCCGGAACTGACCGAGGCCATCGCGCGCGACCAGTTGCTGAGCGCCGATCGCCACATGAAGCTGTCCGAGGTGCCCGCGCTGGAAGCCATCGTCGACCGCCTCCATGATACCCTGAAACCCGAGGATCTCGACCGCGTTCGGTCCGGCGATTTCGCCCCGCTCAACGAACAGGTCCGAGATCCGGCACTCCGGGCCGCCGTCGCCCATGAACTTAAGAACGAGGGCGACCTCGGTCAATCGAGCGAGGTCGGACCTTGGGCAGATCTGGCACGGGCGCAGCATCGCGCCGCAGAACTGGGGCAGCGCGACCGCGCCGTCGAACGCGACACCGGCCACGAACTCTGA
PROTEIN sequence
Length: 626
MTRSPSVEDLVLGHVLDDRRRGRGGGDGSSSRLGTRKERQTRALLRNASGPRGWQSVVKRIAGGSARTPQELKRLLDYVAREEGVQSTWCNLAGYERDFDPARTERTADTWSSTWIGAPRRGHADHIVLSFPRGVDAEHAEVIAREWGQAVFGSGEYGDAWRYVAALHKDTDHLHAHFVVDKHGIEEGRFLSICRHAALNFDVMRELHAEISQSHGLNILASSRLSRGIIENPPRQSELRASREGGKATPPAPPPLSDGERSRRLAAMQGFAREYETLGDLAGLAATTGAEAGTSSYLSRLARALGASAAALRQGVPLMPDHSLHAEGDPAARVEAARSEMIASATEAWEAIRAMEPSAERVDLERSFAEQARASLKLAPESVLLAEHAQVADRNTDPYHNPTLASLARLEQGQTEGVTLDEGLRTTLAHVRDEIGERLTALFSIREDELRIAGTSVEEMVARFSLADRSEGQRASWITEQPNTMQKVFWMETERALGEEVRAEVASFNLAPELTEAIARDQLLSADRHMKLSEVPALEAIVDRLHDTLKPEDLDRVRSGDFAPLNEQVRDPALRAAVAHELKNEGDLGQSSEVGPWADLARAQHRAAELGQRDRAVERDTGHEL*