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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103

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Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_1
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

400..1713
DNA (1314bp) protein (438aa)
RNA polymerase sigma factor SigA n=4 Tax=Finegoldia magna RepID=B0S1K1_FINM2
RNA polymerase sigma A factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RNA polymerase sigma A factor
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_2
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

2276..2455
DNA (180bp) protein (60aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_3
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

2477..3184
DNA (708bp) protein (236aa)
Inner membrane protein CreD n=1 Tax=Serratia plymuthica A30 RepID=L0VV92_SERPL
creD; inner membrane protein CreD Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
membrane protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_4
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

3603..4187
DNA (585bp) protein (195aa)
GCN5-like N-acetyltransferase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Acetyltransferase GNAT family protein id=2193174 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
GCN5-like N-acetyltransferase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_5
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

4443..4715
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B75A65
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_6
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

4715..4972
DNA (258bp) protein (86aa)
translation repressor RelE n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B36E24
translation repressor RelE Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_7
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

5828..7057
DNA (1230bp) protein (410aa)
cellulase (EC:3.2.1.4) Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
cellulase (EC:3.2.1.4)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI000381C599
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_8
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

7387..7983
DNA (597bp) protein (199aa)
hypothetical protein; K07023 putative hydrolases of HD superfamily Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Metal dependent phosphohydrolase id=3135681 bin=GWC2_Nitrospirae_57_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_9
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

8121..8753
DNA (633bp) protein (211aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_10
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(8798..10333)
DNA (1536bp) protein (512aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
fibronectin type III domain-containing protein id=15190463 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_11
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(10317..10871)
DNA (555bp) protein (185aa)
RNA polymerase sigma factor, ECF sub n=1 Tax=Bacillus cereus R309803 RepID=C2QJ07_BACCE
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
ECF subfamily RNA polymerase sigma-24 subunit
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_12
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

11068..11517
DNA (450bp) protein (150aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_13
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

11597..11731
DNA (135bp) protein (45aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_14
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

11912..12190
DNA (279bp) protein (93aa)
id=3940427 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
id=3940427 bin=GWB1_Berkelbacteria_38_5 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_15
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

12283..12630
DNA (348bp) protein (116aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_16
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(12719..13366)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037EAD82
HAD-superfamily hydrolase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
HAD-superfamily hydrolase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_17
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(13597..13776)
DNA (180bp) protein (60aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_18
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(13839..14591)
DNA (753bp) protein (251aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100) Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-ketoacyl-ACP reductase n=1 Tax=[Clostridium] glycolicum RepID=UPI00037933E2
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_19
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

14914..16371
DNA (1458bp) protein (486aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_20
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

16766..17287
DNA (522bp) protein (174aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_21
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(17656..19143)
DNA (1488bp) protein (496aa)
Transporter n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J4H9_MARPK
SNF family Na+-dependent transporter; K03308 neurotransmitter:Na+ symporter, NSS family Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
SNF family Na+-dependent transporter
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_22
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

19331..19717
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3D4_CALAS
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_23
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(19820..20242)
DNA (423bp) protein (141aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_24
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

20684..21502
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000375F917
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
protein-disulfide isomerase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_25
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

21574..21990
DNA (417bp) protein (139aa)
transmembrane_regions 57..79 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
transmembrane_regions 57..79 id=99386 bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_26
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

22003..22398
DNA (396bp) protein (132aa)
transmembrane_regions 7..25 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
transmembrane_regions 7..25 id=120602 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_27
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

22475..23419
DNA (945bp) protein (315aa)
Na+/Ca+ antiporter, CaCA family n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q116H7_TRIEI
CaCA family Na(+)/Ca(+) antiporter Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
CaCA family Na(+)/Ca(+) antiporter
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_28
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

23497..26100
DNA (2604bp) protein (868aa)
calcium-translocating P-type ATPase; K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003825E53
calcium-translocating P-type ATPase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_29
RIFOXYD1_FULL_Bdellovibrionales_44_7_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

26102..26383
DNA (282bp) protein (94aa)
Tax=RIFOXYD1_FULL_Bdellovibrionales_44_7_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1103_30
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(26446..27009)
DNA (564bp) protein (188aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LPE9_HALO1
exonuclease RNase T and DNA polymerase III Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
exonuclease RNase T and DNA polymerase III
Displaying items 1-30 of 49 in total

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