ggKbase home page

gwc1_scaffold_68

Alias: GWC1_WWE3_44_308_1

Search features with annotation key words

Displaying items 1-30 of 100 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_68_1

Not on your lists

3..3350
DNA (3348bp) protein (1116aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
mta:Moth_2468 rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] alias=RAAC2_WWE3_C00001G00053,RAAC2_WWE3_53 id=725100 tax=RAAC2_WWE3 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3
hypothetical protein
gwc1_scaffold_68_2
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

3366..7034
DNA (3669bp) protein (1223aa)
ace:Acel_0300 DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] alias=RAAC2_WWE3_C00001G00054,RAAC2_WWE3_54 id=725101 tax=RAAC2_WWE3 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=WWE3
hypothetical protein
DNA-directed RNA polymerase subunit beta' Tax=GWD2_WWE3_42_34
gwc1_scaffold_68_3

Not on your lists


7037..7459
DNA (423bp) protein (141aa)
hypothetical protein
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 alias=RAAC2_WWE3_C00001G00055,RAAC2_WWE3_55 id=725102 tax=RAAC2_WWE3 species=unknown genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3
gwc1_scaffold_68_4
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists


7456..7923
DNA (468bp) protein (156aa)
hypothetical protein
30S ribosomal protein S7 Tax=GWD2_WWE3_42_34
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 alias=RAAC2_WWE3_C00001G00056,RAAC2_WWE3_56 id=725103 tax=RAAC2_WWE3 species=Fervidobacterium pennivorans genus=Fervidobacterium taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae organism_group=WWE3
gwc1_scaffold_68_5
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

7960..10044
DNA (2085bp) protein (695aa)
hypothetical protein
Elongation factor G Tax=GWD2_WWE3_42_34
cow:Calow_0655 translation elongation factor g; K02355 elongation factor G alias=RAAC2_WWE3_C00001G00057,RAAC2_WWE3_57 id=725104 tax=RAAC2_WWE3 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3
gwc1_scaffold_68_6
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

10166..11344
DNA (1179bp) protein (393aa)
hypothetical protein
Elongation factor Tu Tax=GWD2_WWE3_42_34
ttr:Tter_1827 translation elongation factor Tu; K02358 elongation factor Tu alias=RAAC2_WWE3_C00001G00058,RAAC2_WWE3_58 id=725105 tax=RAAC2_WWE3 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3
gwc1_scaffold_68_7

Not on your lists


11361..11717
DNA (357bp) protein (119aa)
hypothetical protein
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 alias=RAAC2_WWE3_C00001G00059,RAAC2_WWE3_59 id=725106 tax=RAAC2_WWE3 species=unknown genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes organism_group=WWE3
gwc1_scaffold_68_8

Not on your lists


11879..12307
DNA (429bp) protein (143aa)
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000313|EMBL:AHB40007.1}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 alias=RAAC2_WWE3_C00001G00060,RAAC2_WWE3_60 id=725107 tax=RAAC2_WWE3 species=unknown genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=WWE3
gwc1_scaffold_68_9
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists


12309..12932
DNA (624bp) protein (208aa)
50S ribosomal protein L4
50S ribosomal protein L4 Tax=GWD2_WWE3_42_34
50S ribosomal protein L4
gwc1_scaffold_68_10
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists


12929..13219
DNA (291bp) protein (97aa)
50S ribosomal protein L23
50S ribosomal protein L23 Tax=GWD2_WWE3_42_34
50S ribosomal protein L23
gwc1_scaffold_68_11

Not on your lists


13222..14055
DNA (834bp) protein (278aa)
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000313|EMBL:AHB40010.1}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 alias=RAAC2_WWE3_C00001G00063,RAAC2_WWE3_63 id=725110 tax=RAAC2_WWE3 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=WWE3
gwc1_scaffold_68_12

Not on your lists


14085..14354
DNA (270bp) protein (90aa)
rpsS; ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
rpsS; ribosomal protein S19; K02965 small subunit ribosomal protein S19 alias=RAAC2_WWE3_C00001G00064,RAAC2_WWE3_64 id=725111 tax=RAAC2_WWE3 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae organism_group=WWE3
gwc1_scaffold_68_13

Not on your lists


14360..14713
DNA (354bp) protein (118aa)
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 alias=RAAC2_WWE3_C00001G00065,RAAC2_WWE3_65 id=725112 tax=RAAC2_WWE3 species=Buchnera aphidicola genus=Buchnera taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=WWE3
gwc1_scaffold_68_14
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists


14717..15349
DNA (633bp) protein (211aa)
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 Tax=GWD2_WWE3_42_34
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 alias=RAAC2_WWE3_C00001G00066,RAAC2_WWE3_66 id=725113 tax=RAAC2_WWE3 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=WWE3
gwc1_scaffold_68_15
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists


15352..15759
DNA (408bp) protein (136aa)
50S ribosomal protein L16 Tax=GWD2_WWE3_42_34
rplP; 50S ribosomal protein L16
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 alias=RAAC2_WWE3_C00001G00067,RAAC2_WWE3_67 id=725114 tax=RAAC2_WWE3 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=WWE3
gwc1_scaffold_68_16

Not on your lists


15764..15976
DNA (213bp) protein (71aa)
hypothetical protein
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
gwc1_scaffold_68_17

Not on your lists


15978..16241
DNA (264bp) protein (88aa)
hypothetical protein
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 alias=RAAC2_WWE3_C00001G00069,RAAC2_WWE3_69 id=725116 tax=RAAC2_WWE3 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3
gwc1_scaffold_68_18
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists


16243..16608
DNA (366bp) protein (122aa)
hypothetical protein
50S ribosomal protein L14 Tax=GWD2_WWE3_42_34
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 alias=RAAC2_WWE3_C00001G00070,RAAC2_WWE3_70 id=725117 tax=RAAC2_WWE3 species=Coriobacterium glomerans genus=Coriobacterium taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=WWE3
gwc1_scaffold_68_19

Not on your lists


16613..16930
DNA (318bp) protein (106aa)
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
50S ribosomal protein L24
gwc1_scaffold_68_20

Not on your lists


16933..17478
DNA (546bp) protein (182aa)
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 alias=RAAC2_WWE3_C00001G00072,RAAC2_WWE3_72 id=725119 tax=RAAC2_WWE3 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=WWE3
gwc1_scaffold_68_21
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists


17480..17665
DNA (186bp) protein (62aa)
Ribosomal protein S14 n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NBP6_9BACT alias=ACD22_C00076G00003,ACD22_4842.19170.19G0003,ACD22_4842.19170.19_3 id=23321 tax=ACD22 species=Victivallis vadensis genus=Victivallis taxon_order=unknown taxon_class=unknown phylum=Lentisphaerae organism_group=WWE3 organism_desc=WWE3
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
30S ribosomal protein S14
gwc1_scaffold_68_22
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists


17668..18066
DNA (399bp) protein (133aa)
30S ribosomal protein S8 Tax=GWD2_WWE3_42_34
rpsH; 30S ribosomal protein S8
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 alias=RAAC2_WWE3_C00001G00073,RAAC2_WWE3_73 id=725120 tax=RAAC2_WWE3 species=Nitratiruptor sp. SB155-2 genus=Nitratiruptor taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria organism_group=WWE3
gwc1_scaffold_68_23
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists


18069..18617
DNA (549bp) protein (183aa)
50S ribosomal protein L6
50S ribosomal protein L6 Tax=GWD2_WWE3_42_34
50S ribosomal protein L6
gwc1_scaffold_68_24

Not on your lists


18640..18999
DNA (360bp) protein (120aa)
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 alias=RAAC2_WWE3_C00001G00075,RAAC2_WWE3_75 id=725122 tax=RAAC2_WWE3 species=unknown genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes organism_group=WWE3
gwc1_scaffold_68_25

Not on your lists


18996..19454
DNA (459bp) protein (153aa)
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000313|EMBL:AHB40023.1}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 alias=RAAC2_WWE3_C00001G00076,RAAC2_WWE3_76 id=725123 tax=RAAC2_WWE3 species=unknown genus=Campylobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria organism_group=WWE3
gwc1_scaffold_68_26

Not on your lists


19459..19896
DNA (438bp) protein (146aa)
hypothetical protein
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 alias=RAAC2_WWE3_C00001G00077,RAAC2_WWE3_77 id=725124 tax=RAAC2_WWE3 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes organism_group=WWE3
gwc1_scaffold_68_27

Not on your lists


19889..21145
DNA (1257bp) protein (419aa)
hypothetical protein
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium
sti:Sthe_1056 preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY alias=RAAC2_WWE3_C00001G00078,RAAC2_WWE3_78 id=725125 tax=RAAC2_WWE3 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3
gwc1_scaffold_68_28
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

21157..21423
DNA (267bp) protein (89aa)
hypothetical protein
Tax=GWD2_WWE3_42_34
gwc1_scaffold_68_29
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

21447..22046
DNA (600bp) protein (200aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] alias=RAAC2_WWE3_C00001G00080,RAAC2_WWE3_80 id=725127 tax=RAAC2_WWE3 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota organism_group=WWE3
hypothetical protein
Adenylate kinase Tax=GWD2_WWE3_42_34
gwc1_scaffold_68_30

Not on your lists

22111..23103
DNA (993bp) protein (331aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB40028.1}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
hypothetical protein alias=RAAC2_WWE3_C00001G00081,RAAC2_WWE3_81 id=725128 tax=RAAC2_WWE3 species=Paenibacillus sp. HGF7 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=WWE3
Displaying items 1-30 of 100 in total

View Taxonomy