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RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..167
DNA (165bp) protein (55aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_2
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

480..911
DNA (432bp) protein (144aa)
PIN domain protein n=3 Tax=Leptospira RepID=I0XQ56_9LEPT
PIN domain-containing protein; K07065 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PIN domain-containing protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_3
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(926..2164)
DNA (1239bp) protein (413aa)
major facilitator transporter Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
major facilitator transporter
Major facilitator superfamily MFS_1 id=3908387 bin=GWC2_Syntrophus__56_31 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_4
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2161..2376)
DNA (216bp) protein (72aa)
Pyruvate formate-lyase activating enzyme n=1 Tax=Azoarcus sp. KH32C RepID=H0PTV4_9RHOO
pflA; pyruvate formate-lyase activating enzyme Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
pflA; pyruvate formate-lyase activating enzyme
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_5
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2369..3142)
DNA (774bp) protein (258aa)
radical SAM family protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Radical SAM n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222A3_RHOFD
radical SAM family protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_6
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3139..4503)
DNA (1365bp) protein (455aa)
hypothetical protein; K06990 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
hypothetical protein; K06990 id=12494613 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_7
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4586..5080)
DNA (495bp) protein (165aa)
CinA domain-containing protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABG4_9PROT
CinA domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
CinA domain-containing protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_8
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5080..5568)
DNA (489bp) protein (163aa)
Phosphatidylglycerophosphatase (EC:3.1.3.27); K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Phosphatidylglycerophosphatase (EC:3.1.3.27)
Phosphatidylglycerophosphatase A n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH50_9PROT
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_9
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5565..6518)
DNA (954bp) protein (318aa)
thiL; thiamine-phosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
thiL; thiamine-phosphate kinase (EC:2.7.4.16)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036D6F38
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_10
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6538..6972)
DNA (435bp) protein (145aa)
N utilization substance protein B homolog n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QH30_AZOSU
transcription antitermination factor NusB; K03625 N utilization substance protein B Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
transcription antitermination factor NusB
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_11
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6963..7388)
DNA (426bp) protein (142aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Burkholderia kururiensis RepID=UPI000344AE62
6,7-dimethyl-8-ribityllumazine synthase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
6,7-dimethyl-8-ribityllumazine synthase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_12
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7385..8506)
DNA (1122bp) protein (374aa)
ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.99.12); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RIFCSPLOWO2_02_FULL_Betapro
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2GSH8_9BURK
bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8592..8978)
DNA (387bp) protein (129aa)
50S ribosomal protein L19 n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RDX6_9RHOO
rplS; ribosomal protein L19 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
50S ribosomal protein L19
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_14
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8975..9718)
DNA (744bp) protein (248aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=TRMD_AROAE
trmD; tRNA (guanine-N(1)-)-methyltransferase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_15
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9739..10074)
DNA (336bp) protein (112aa)
Ribosome maturation factor RimM n=1 Tax=Thauera terpenica 58Eu RepID=S9ZQJ2_9RHOO
rimM; 16S rRNA processing protein; K02860 16S rRNA processing protein RimM Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rimM; 16S rRNA processing protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_16
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10244..10501)
DNA (258bp) protein (86aa)
30S ribosomal protein S16 n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=RS16_NITEU
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rpsP; 30S ribosomal protein S16
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_17
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10588..10827)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K4H2_DESAC
hypothetical protein
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_18
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10860..12212)
DNA (1353bp) protein (451aa)
Signal recognition particle protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QME4_AZOSU
signal recognition particle protein; K03106 signal recognition particle subunit SRP54 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
signal recognition particle protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_19
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12231..13082
DNA (852bp) protein (284aa)
CcsA-related protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHP5_9PROT
cytochrome c assembly protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
cytochrome C assembly protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_20
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13126..14445
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZN46_9RHOO
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_21
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14561..15784
DNA (1224bp) protein (408aa)
Type II secretory pathway, component PulF n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QME1_AZOSU
type II secretory pathway, component PulF; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
type II secretory pathway, component PulF
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_22
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15821..16693
DNA (873bp) protein (291aa)
pilD; prepilin peptidase (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
pilD; prepilin peptidase (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y6C8_9RHOO
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_23
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16690..17298
DNA (609bp) protein (203aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Thauera phenylacetica B4P RepID=N6ZL56_9RHOO
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_24
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17375..18133
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00035E93CB
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_25
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18319..19233)
DNA (915bp) protein (305aa)
Thiamine monophosphate synthase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AD88_9PROT
thiamine monophosphate synthase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
thiamine monophosphate synthase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_26
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19230..20087)
DNA (858bp) protein (286aa)
ATPase AAA n=1 Tax=Massilia niastensis RepID=UPI000365C75D
hypothetical protein; K06923 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_6414_27
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20084..20959)
DNA (876bp) protein (292aa)
argJ; arginine biosynthesis bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.1 2.3.1.35); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=blood disease bacterium R229 RepID=G2ZR22_9RALS
argJ; Arginine biosynthesis bifunctional protein argJ [Includes: Glutamate N-acetyltransferase (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (N-acetyl
Displaying 27 items

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