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RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..330)
DNA (330bp) protein (110aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein; K01989 putative ABC transport system substrate-binding protein id=14627983 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_trna_3
unknown

Not on your lists

comp(397..468)
DNA (72bp)
transferRNA
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_trna_2
unknown

Not on your lists

comp(489..562)
DNA (74bp)
transferRNA
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_trna_1
unknown

Not on your lists

comp(583..656)
DNA (74bp)
transferRNA
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_2
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

807..1232
DNA (426bp) protein (142aa)
RNA polymerase-binding transcription factor DksA n=1 Tax=Azoarcus sp. KH32C RepID=H0PZN3_9RHOO
dksA; TraR/DksA family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
dksA; TraR/DksA family transcriptional regulator
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_3
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1302..3407)
DNA (2106bp) protein (702aa)
pnp; polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
pnp; polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKK3_9PROT
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_4
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3490..3759)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RWW3_9BURK
30S ribosomal protein S15P; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
30S ribosomal protein S15
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_5
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3807..4742)
DNA (936bp) protein (312aa)
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
tRNA pseudouridine synthase B n=1 Tax=Thauera aminoaromatica S2 RepID=N6YU05_9RHOO
truB; tRNA pseudouridine synthase B
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_6
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4739..5104)
DNA (366bp) protein (122aa)
Ribosome-binding factor A n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RBFA_DECAR
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rbfA; ribosome-binding factor A
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_7
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5112..7661)
DNA (2550bp) protein (850aa)
Translation initiation factor IF-2 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK83_9PROT
translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
translation initiation factor IF-2
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_8
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7664..9178)
DNA (1515bp) protein (505aa)
Transcription elongation factor NusA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B4L2_9PROT
nusA; transcription elongation factor NusA Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
nusA; transcription elongation factor NusA
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_9
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9194..9628)
DNA (435bp) protein (145aa)
Ribosome maturation factor RimP n=1 Tax=Nitrosospira sp. APG3 RepID=M5DV34_9PROT
hypothetical protein; K09748 ribosome maturation factor RimP Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_10
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9699..10520)
DNA (822bp) protein (274aa)
ribosomal large subunit pseudouridine synthase B; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
RNA pseudouridine synthase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036266F6
ribosomal large subunit pseudouridine synthase B
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_11
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10462..11046)
DNA (585bp) protein (195aa)
Putative segregation and condensation protein B n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K7C3_AZOSB
scpB; putative segregation and condensation protein B; K06024 segregation and condensation protein B Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
scpB; putative segregation and condensation protein B
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_12
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11033..11818)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VGW6_9BURK
putative Segregation and condensation protein A Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
putative Segregation and condensation protein A
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11815..13017)
DNA (1203bp) protein (401aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D9I4_LARHH
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_14
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13020..13685)
DNA (666bp) protein (222aa)
Conserved hypothetical membrane protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K7C5_AZOSB
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_15
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13717..14376)
DNA (660bp) protein (220aa)
YciO family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DEZ9_9PROT
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Sua5/YciO/YrdC/YwlC family protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_16
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14381..15301)
DNA (921bp) protein (307aa)
alpha/beta hydrolase n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002FAEA04
alpha/beta hydrolase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
alpha/beta hydrolase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_17
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15298..16059)
DNA (762bp) protein (254aa)
3-hydroxyacyl-CoA dehydrogenase n=2 Tax=Ralstonia solanacearum RepID=M4UF24_RALSL
3-hydroxyacyl-CoA dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
3-hydroxyacyl-CoA dehydrogenase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_18
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16119..16958
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9W8_NITMU
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4572_19
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16955..19498
DNA (2544bp) protein (848aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9W8_NITMU
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
Displaying 22 items

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