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RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_22

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_68_150

near complete RP 50 / 55 BSCG 50 / 51 ASCG 12 / 38
Location: 17786..19492

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RCX5_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 452.0
  • Bit_score: 493
  • Evalue 2.70e-136
sigma-70 family RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 568.0
  • Bit_score: 1101
  • Evalue 0.0
rpoD; RNA polymerase sigma factor rpoD, Sigma-70 similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 518.0
  • Bit_score: 527
  • Evalue 3.70e-147

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Taxonomy

R_Betaproteobacteria_68_150 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1707
ATGGCAAAAGACAAGCGCAAGCGATTCACCAAACCGGCCGCCGGACAGAAGAAAAAACCCAAGGCCGTCAAGCGCTTGAAGCCGCAGCGCAGCGCCAAGGCGCATCCCGTGCGCAAGGCCGCTTCGCCGGCCAAGGCCCGCCGCGCAACGCTGGCGAACGGGCGCGCCAGGCCGGCGGCGGCGAAAAAGCCGGTCAAGGAACCGCGTCAGGCGCGAAAGGGCGCTGCGCCGGCCAAGGCGCCGGCCAAGGCGGTGCCGGCGAAGGCCGAAGCCAGGAAGGGCAAGCCGACCATCAAGAGTACGCGGCAGGCGCTCGAAGTCCTCGAGGCGCGGGTCAACGAAGGACTCAAGGCCTCGAAGGCCAAAGGCGGGCGTCCGCCGCGCAAGGGGCGCAAGGGCGAATGGCTGCTCGCGACCGCGGAGTTGCCGCGCGAAGATGCCGAAACGCGGCGCACGCGGTTGAAGAACCTGATCAAGCTCGGCAAGGAGCGCGGCTTCCTCACCTACTCCGAGATCAACGACCATCTGCCCGACGATCTGGTCGATGCCGAGCAGATCGAGGCCATCATCTCGACCTTCGGCGACATGGGGATCCAGGTCTACGACCAGGCTCCCGACCAGGAGACGCTGCTGATCGCCGAGCAGGCGCCGGTTGCCACGGTCGACGAAGACGTCGAAGAGCAGGCCGAGGCAGCACTTTCCACGGTGGATTCGGAGTTCGGCCGCACCACCGACCCGGTGCGCATGTACATGCGCGAGATGGGTTCCGTCGAGCTTCTCACGCGGGAGGGCGAGATCGAGATCGCCAAGCGCATCGAGGAGGGGCTGCGCCACATGGTGCAGGCGATTTCGGCGTGCCCGACCACGGTCCAGGAAATTCTCGACCTCGCCGCAAAGGTCGAGAAGGACGAGCTGCGCATCGACGAGGTCGTCGACGGCCTGATCGATCCGAATGCCAAGGACGATTTCGACCCGAAGAAGGCCGAAGCCGTGGAGGACGAGGACGAGGCGATCGAGGAGGAAGAGCTGTCCGAGGAGGACGAAGCCGCGGCGCAATCGGCGAGCCTGCTGCAGCTCAAGAACGAGGCGCTGGAGAAGTACGCCCGCATCCGCCGCCTGTACGAGAAGCTCAAGCGCGTGCTCGAAGCCAAGGGCTCGAAGGACAAGGACTATCTGCGCGTGCGCGACCAGATCGGCGCCGAACTGATGACGATCCGCTTCACTGCGCGCACCGTAGAGCGCCTCTGCGACAGCGTGCGCGGACTGGTGGAGGAAATCCGCTCGCACGAGCGCGCGATCCACGACATCTGCGTGCACAAGGCGCAGATGCCGCGGCAGCACTTCCTCAAGGTCTTTGCCGGCACCGAGGGCTCCAAGCGCTGGCTGACCACCGAGATCAACGCCGGGCATCCGTGGAGCGAGGCGCTGGTGCGGCTGGAACCTTCGATCCTCGAATCGCTGGGCAAGATCCAGGCCGTACAGCAGAAGATCGGCATCCCGATCCGCGACCTGAAGGACATCAACAAGCAGATGTCGACGGGTGAGGCCAAGGCGCGCCGCGCCAAGCGCGAGATGACCGAGGCGTGGACAAGTTCGAGTATCGCCGCGGCTACAAGTTCTCCACCTACGCCACCTGGTGGATCCGGCAGGCGATCACCCGTTCGATCGCTGACCAGGCGCGCACCATCCGCATCCCGGTGCACATGA
PROTEIN sequence
Length: 569
MAKDKRKRFTKPAAGQKKKPKAVKRLKPQRSAKAHPVRKAASPAKARRATLANGRARPAAAKKPVKEPRQARKGAAPAKAPAKAVPAKAEARKGKPTIKSTRQALEVLEARVNEGLKASKAKGGRPPRKGRKGEWLLATAELPREDAETRRTRLKNLIKLGKERGFLTYSEINDHLPDDLVDAEQIEAIISTFGDMGIQVYDQAPDQETLLIAEQAPVATVDEDVEEQAEAALSTVDSEFGRTTDPVRMYMREMGSVELLTREGEIEIAKRIEEGLRHMVQAISACPTTVQEILDLAAKVEKDELRIDEVVDGLIDPNAKDDFDPKKAEAVEDEDEAIEEEELSEEDEAAAQSASLLQLKNEALEKYARIRRLYEKLKRVLEAKGSKDKDYLRVRDQIGAELMTIRFTARTVERLCDSVRGLVEEIRSHERAIHDICVHKAQMPRQHFLKVFAGTEGSKRWLTTEINAGHPWSEALVRLEPSILESLGKIQAVQQKIGIPIRDLKDINKQMSTGEAKARRAKREMTEAWTSSSIAAATSSPPTPPGGSGRRSPVRSLTRRAPSASRCT*