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RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..192
DNA (192bp) protein (64aa)
succinate dehydrogenase membrane anchor n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000345C475
hypothetical protein; K00246 fumarate reductase subunit C Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_2
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189..521
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000379D861
succinate dehydrogenase/fumarate reductase cytochrome b-556 subunit; K00247 fumarate reductase subunit D Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
succinate dehydrogenase/fumarate reductase cytochrome b-556 subunit
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_3
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

550..1512
DNA (963bp) protein (321aa)
Extra-cytoplasmic solute receptor family protein n=1 Tax=Ralstonia sp. PBA RepID=I9BVN1_9RALS
Uncharacterized protein UPF0065 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Tricarboxylate transport protein TctC
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_4
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1509..2384
DNA (876bp) protein (292aa)
ttdA; fumarate hydratase subunit alpha (EC:4.2.1.2); K03779 L(+)-tartrate dehydratase alpha subunit [EC:4.2.1.32] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
ttdA; fumarate hydratase subunit alpha (EC:4.2.1.2)
Fumarate hydratase alpha subunit n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HYF3_BORPD
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_5
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2374..2949
DNA (576bp) protein (192aa)
Putative lipoprotein transmembrane n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUT9_ACCPU
putative lipoprotein transmembrane Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
putative lipoprotein transmembrane
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_6
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2954..3565
DNA (612bp) protein (204aa)
L(+)-tartrate or fumarate dehydratase subunit beta (EC:4.2.1.32); K03780 L(+)-tartrate dehydratase beta subunit [EC:4.2.1.32] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
L(+)-tartrate or fumarate dehydratase subunit beta (EC:4.2.1.32)
Putative tartrate dehydratase n=1 Tax=Herminiimonas arsenicoxydans RepID=A4GAA0_HERAR
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_7
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3599..4561
DNA (963bp) protein (321aa)
Candidate periplasmic component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZE8_RAMTT
periplasmic protein; K07080 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
periplasmic protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_8
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4624..6654
DNA (2031bp) protein (677aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUZ9_PUSST
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_9
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6641..8389
DNA (1749bp) protein (583aa)
fumarate reductase, or succinate dehydrogenase, flavoprotein subunit (EC:1.3.99.1); K00244 fumarate reductase flavoprotein subunit [EC:1.3.99.1] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curat
Fumarate reductase, or succinate dehydrogenase, flavoprotein subunit n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S7L2_9BURK
Succinate dehydrogenase flavoprotein subunit
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_10
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8471..9466)
DNA (996bp) protein (332aa)
Uncharacterized protein UPF0065 n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTY1_POLNA
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_11
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9521..10714)
DNA (1194bp) protein (398aa)
Putative Formyl-CoA transferase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGU6_AZOBR
putative Formyl-CoA transferase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
putative Formyl-CoA transferase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_12
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10723..11391)
DNA (669bp) protein (223aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase id=2961507 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11434..11928
DNA (495bp) protein (165aa)
ada; methylated-DNA-[protein]-cysteine S-methyltransferase Ada (EC:2.1.1.63); K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_1
Methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000373868C
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_14
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11898..12806
DNA (909bp) protein (303aa)
Tyrosine recombinase XerD n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AD82_9PROT
xerD; tyrosine recombinase XerD Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
xerD; tyrosine recombinase XerD
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_15
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12803..12937
DNA (135bp) protein (45aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_16
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12941..13294)
DNA (354bp) protein (118aa)
dihydroneopterin aldolase; K01633 dihydroneopterin aldolase [EC:4.1.2.25] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Dihydroneopterin aldolase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SIX3_GALCS
dihydroneopterin aldolase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_17
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13324..13929
DNA (606bp) protein (202aa)
glycerol-3-phosphate acyltransferase PlsY; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Glycerol-3-phosphate acyltransferase n=3 Tax=Ralstonia solanacearum RepID=PLSY_RALSO
glycerol-3-phosphate acyltransferase PlsY
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_18
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14004..15035)
DNA (1032bp) protein (344aa)
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0EH39_9BURK
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_19
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15119..15331
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=1 Tax=Leeia oryzae RepID=UPI00036C366A
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rpsU; 30S ribosomal protein S21
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_20
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15440..15886
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJ18_9PROT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_21
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15921..17732
DNA (1812bp) protein (604aa)
DNA primase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAU9_9PROT
DNA primase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
DNA primase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_22
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17786..19492
DNA (1707bp) protein (569aa)
RNA polymerase sigma factor RpoD n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RCX5_9RHOO
sigma-70 family RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rpoD; RNA polymerase sigma factor rpoD, Sigma-70
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_3671_23
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19489..19638
DNA (150bp) protein (50aa)
RNA polymerase sigma factor RpoD n=1 Tax=Rhodocyclaceae RepID=UPI00036BCC9A
sigma-70 family RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
sigma-70 family RNA polymerase sigma factor
Displaying 23 items

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