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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(216..998)
DNA (783bp) protein (261aa)
enoyl-CoA hydratase/isomerase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
enoyl-CoA hydratase/isomerase family protein id=14626120 bin=bin7_NC10_sister species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
enoyl-CoA hydratase/isomerase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(995..1579)
DNA (585bp) protein (195aa)
NUDIX hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
NUDIX hydrolase id=14626121 bin=bin7_NC10_sister species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
DNA mismatch repair protein MutT
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1580..2359)
DNA (780bp) protein (260aa)
enoyl-CoA hydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
enoyl-CoA hydratase id=14626122 bin=bin7_NC10_sister species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
enoyl-CoA hydratase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2390..4339)
DNA (1950bp) protein (650aa)
TRAP transporter, 4TM/12TM fusion protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
TRAP transporter, 4TM/12TM fusion protein id=14626123 bin=bin7_NC10_sister species=Salsuginibacillus kocurii genus=Salsuginibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
TRAP transporter, 4TM/12TM fusion protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5336..6034)
DNA (699bp) protein (233aa)
2-nitropropane dioxygenase; K02371 enoyl-[acyl carrier protein] reductase II [EC:1.3.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
2-nitropropane dioxygenase; K02371 enoyl-[acyl carrier protein] reductase II [EC:1.3.1.-] id=14626125 bin=bin7_NC10_sister species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
2-nitropropane dioxygenase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6453..7439)
DNA (987bp) protein (329aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K01989 putative ABC transport system substrate-binding protein id=14626126 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7546..8322)
DNA (777bp) protein (259aa)
mhpD; 2-keto-4-pentenoate hydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
2-hydroxypent-2,4-dienoate hydratase (Protein belongs to CMGI-2) id=4117857 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-keto-4-pentenoate hydratase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8319..9089)
DNA (771bp) protein (257aa)
sir2 family protein; K12410 NAD-dependent deacetylase [EC:3.5.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
sat:SYN_01020 Sir2 family NAD-dependent deacetylase; K12410 NAD-dependent deacetylase [EC:3.5.1.-] id=1241516 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
sir2 family protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9092..9433)
DNA (342bp) protein (114aa)
id=4117858 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=4117858 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10510..11694)
DNA (1185bp) protein (395aa)
acaB-2; acetyl-CoA acetyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Propanoyl-CoA C-acyltransferase id=1890943 bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium rhodesiae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acaB-2; acetyl-CoA acetyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11849..12079)
DNA (231bp) protein (77aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12285..13196)
DNA (912bp) protein (304aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Uncharacterized conserved protein id=3830375 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13224..14225
DNA (1002bp) protein (334aa)
aminocarboxymuconate-semialdehyde decarboxylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative TIM-barrel fold metal-dependent hydrolase id=3830378 bin=GWA2_Methylomirabilis_73_35 species=Pseudomonas sp. GM67 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aminocarboxymuconate-semialdehyde decarboxylase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

14237..15214
DNA (978bp) protein (326aa)
lactate dehydrogenase-like oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
D-3-phosphoglycerate dehydrogenase id=3033643 bin=GWC2_Methylomirabilis_70_16 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
lactate dehydrogenase-like oxidoreductase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_15
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

15259..15396
DNA (138bp) protein (46aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=4327970 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15733..16587
DNA (855bp) protein (285aa)
amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Amino acid/amide ABC transporter membrane protein 1, HAAT family id=4547724 bin=GWF2_Methylomirabilis_70_14 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid/amide ABC transporter membrane protein 1, HAAT family
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

16584..17561
DNA (978bp) protein (326aa)
amino acid ABC transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC-type transporter, integral membrane subunit id=4827658 bin=GWA2_Methylomirabilis_73_35 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid ABC transporter
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

17596..18837
DNA (1242bp) protein (414aa)
Extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Extracellular ligand-binding receptor id=4827657 bin=GWA2_Methylomirabilis_73_35 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Extracellular ligand-binding receptor
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

18948..19703
DNA (756bp) protein (252aa)
ABC transporter permease; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter permease protein id=3033655 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

19721..20767
DNA (1047bp) protein (349aa)
putative NAD-dependent alcohol dehydrogenase (EC:1.1.1.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Zn alcohol dehydrogenase id=1245734 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
NADPH:quinone oxidoreductase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

20784..21476
DNA (693bp) protein (231aa)
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter related id=4827655 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3273_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

21483..22367
DNA (885bp) protein (295aa)
tartronate semialdehyde reductase (EC:1.1.1.60); K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
tartronate semialdehyde reductase (EC:1.1.1.60)
Tartronate semialdehyde reductase id=4547685 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Rahnella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 22 items

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