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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_9085

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_9085_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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1..126
DNA (126bp) protein (42aa)
methylaspartate mutase subunit E (EC:5.4.99.1); K01846 methylaspartate mutase [EC:5.4.99.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
methylaspartate mutase subunit E (EC:5.4.99.1); K01846 methylaspartate mutase [EC:5.4.99.1] id=14625829 bin=bin7_NC10_sister species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_9085_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

177..1685
DNA (1509bp) protein (503aa)
accC; acetyl CoA carboxylase, biotin carboxylase subunit (EC:6.3.4.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
accC; acetyl CoA carboxylase, biotin carboxylase subunit (EC:6.3.4.14) id=14625830 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
accC; acetyl CoA carboxylase, biotin carboxylase subunit (EC:6.3.4.14)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_9085_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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1689..2189
DNA (501bp) protein (167aa)
Biotin/lipoic acid binding domain protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Biotin/lipoic acid binding domain protein id=14625831 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Biotin/lipoic acid binding domain protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_9085_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2269..3537
DNA (1269bp) protein (423aa)
Selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein; K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein; K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] id=14625832 bin=bin7_NC10_sister species=Stackebrandtia nassauensis genus=Stackebrandtia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
Selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_9085_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3542..4282
DNA (741bp) protein (247aa)
Phosphate-transporting ATPase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Phosphate-transporting ATPase id=14625833 bin=bin7_NC10_sister species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Phosphate-transporting ATPase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_9085_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4300..5154
DNA (855bp) protein (285aa)
gltB1; protein GltB1 (EC:1.4.1.13); K10001 glutamate/aspartate transport system substrate-binding protein id=14625834 bin=bin7_NC10_sister species=Desulfotignum phosphitoxidans genus=Desulfotignum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
family 3 extracellular solute-binding protein; K10001 glutamate/aspartate transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
family 3 extracellular solute-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_9085_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5274..6050
DNA (777bp) protein (259aa)
polar amino acid ABC transporter inner membrane subunit; K10003 glutamate/aspartate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
polar amino acid ABC transporter inner membrane subunit; K10003 glutamate/aspartate transport system permease protein id=14625835 bin=bin7_NC10_sister species=Desulfotignum phosphitoxidans genus=Desulfotignum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
polar amino acid ABC transporter inner membrane subunit
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_9085_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6355..6525)
DNA (171bp) protein (57aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_9085_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6717..7877
DNA (1161bp) protein (387aa)
FAD dependent oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
FAD dependent oxidoreductase id=14625837 bin=bin7_NC10_sister species=Agrobacterium tumefaciens genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
FAD dependent oxidoreductase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_9085_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7883..9115
DNA (1233bp) protein (411aa)
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RND family efflux transporter MFP subunit id=14625838 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RND family efflux transporter MFP subunit
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_9085_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9212..9547)
DNA (336bp) protein (112aa)
hypothetical protein RetlI_08615 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein RetlI_08615 id=4189589 bin=GWF2_Methylomirabilis_70_14 species=Rhizobium etli genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_9085_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9710..10012)
DNA (303bp) protein (101aa)
id=4189588 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=4189588 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_9085_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10103..10480)
DNA (378bp) protein (126aa)
id=4189587 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=4189587 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_9085_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11458..11826
DNA (369bp) protein (123aa)
acrB; hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Cation/multidrug efflux pump; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=14625839 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
acrB; hypothetical protein
Displaying 14 items

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