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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1..360)
DNA (360bp) protein (120aa)
Multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Multi-sensor signal transduction histidine kinase id=4558717 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(742..1389)
DNA (648bp) protein (216aa)
id=14626362 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14626362 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1341..2654)
DNA (1314bp) protein (438aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626880 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2880..4244
DNA (1365bp) protein (455aa)
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator id=14626361 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_trna_1
unknown

Not on your lists

comp(4258..4330)
DNA (73bp)
transferRNA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4780..5031
DNA (252bp) protein (84aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5039..5590
DNA (552bp) protein (184aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5896..6102
DNA (207bp) protein (69aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626360 bin=bin7_NC10_sister species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6127..6849
DNA (723bp) protein (241aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626359 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6841..7149)
DNA (309bp) protein (103aa)
lipoprotein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
lipoprotein id=14626358 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
lipoprotein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7146..7733)
DNA (588bp) protein (196aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626357 bin=bin7_NC10_sister species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin7_NC10_sister organism_group=NC10
fructose-bisphosphate aldolase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7730..8995)
DNA (1266bp) protein (422aa)
glpC; ferredoxin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
glpC; ferredoxin id=14626356 bin=bin7_NC10_sister species=Sulfobacillus thermosulfidooxidans genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(9097..9546)
DNA (450bp) protein (150aa)
rbr; rubrerythrin id=14626355 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
rbr; rubrerythrin Tax=CSP1_6_Rokubacteria
rbr; rubrerythrin
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9586..10071)
DNA (486bp) protein (162aa)
ferric uptake regulator, Fur family; K09825 Fur family transcriptional regulator, peroxide stress response regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ferric uptake regulator, Fur family; K09825 Fur family transcriptional regulator, peroxide stress response regulator id=14626354 bin=bin7_NC10_sister species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ferric uptake regulator, Fur family
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10142..10819
DNA (678bp) protein (226aa)
hypothetical protein; K07150 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K07150 id=14626353 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
protein of unknown function DUF554
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11033..13867
DNA (2835bp) protein (945aa)
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Excinuclease ABC, subunit A id=4232696 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
uvrA; excinuclease ABC subunit A
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

14556..15119
DNA (564bp) protein (188aa)
PAS domain S-box Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Multi-sensor hybrid histidine kinase id=4701609 bin=GWC2_Methylomirabilis_70_24 species=Allochromatium vinosum genus=Allochromatium taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
PAS domain S-box
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15112..16332
DNA (1221bp) protein (407aa)
major facilitator superfamily permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Twin-arginine translocation pathway signal id=2589436 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia thailandensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily permease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

16349..16933
DNA (585bp) protein (195aa)
O-methyltransferase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
type 11 methyltransferase id=14429313 bin=bin3_NC10 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
O-methyltransferase family protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

16937..17551
DNA (615bp) protein (205aa)
Uncharacterized protein (Fragment) n=1 Tax=Macaca mulatta RepID=H9H4G4_MACMU
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
alpha/beta hydrolase fold protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7001_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17731..18246)
DNA (516bp) protein (172aa)
id=14626362 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14626362 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Displaying 21 items

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