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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3..794
DNA (792bp) protein (264aa)
TRAP dicarboxylate transporter subunit DctP Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
TRAP dicarboxylate transporter subunit DctP id=14627160 bin=bin7_NC10_sister species=Desulfospira joergensenii genus=Desulfospira taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
TRAP dicarboxylate transporter subunit DctP
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

791..1315
DNA (525bp) protein (175aa)
tripartite AtP-independent periplasmic transporter subunit DctQ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
tripartite AtP-independent periplasmic transporter subunit DctQ id=14627161 bin=bin7_NC10_sister species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
tripartite AtP-independent periplasmic transporter subunit DctQ
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1315..2598
DNA (1284bp) protein (428aa)
TRAP dicarboxylate transporter subunit DctM Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
TRAP dicarboxylate transporter subunit DctM id=14627162 bin=bin7_NC10_sister species=Aminobacterium colombiense genus=Aminobacterium taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin7_NC10_sister organism_group=NC10
TRAP dicarboxylate transporter subunit DctM
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2653..3267)
DNA (615bp) protein (205aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3583..4032
DNA (450bp) protein (150aa)
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curat
3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] id=14627163 bin=bin7_NC10_sister species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4475..4687
DNA (213bp) protein (71aa)
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] id=14627164 bin=bin7_NC10_sister species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
3-isopropylmalate dehydratase small subunit
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4808..5839
DNA (1032bp) protein (344aa)
mreB; Rod shape-determining protein mreB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
mreB; Rod shape-determining protein mreB id=14626892 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
mreB; Rod shape-determining protein mreB
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5859..6749
DNA (891bp) protein (297aa)
Rod shape-determining protein MreC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Rod shape-determining protein MreC id=14626891 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Rod shape-determining protein MreC
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6902..7396
DNA (495bp) protein (165aa)
Rod shape-determining protein MreD Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Rod shape-determining protein MreD id=14626890 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Rod shape-determining protein MreD
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7387..9180
DNA (1794bp) protein (598aa)
mrdA; peptidoglycan transpeptidase; K05515 penicillin-binding protein 2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
mrdA; peptidoglycan transpeptidase; K05515 penicillin-binding protein 2 id=14626889 bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
mrdA; peptidoglycan transpeptidase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9180..10271
DNA (1092bp) protein (364aa)
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
rod shape-determining protein RodA; K05837 rod shape determining protein RodA id=14626888 bin=bin7_NC10_sister species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
rod shape-determining protein RodA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10281..11792
DNA (1512bp) protein (504aa)
ribonuclease; K08301 ribonuclease G [EC:3.1.26.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ribonuclease; K08301 ribonuclease G [EC:3.1.26.-] id=14626887 bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ribonuclease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11912..12286
DNA (375bp) protein (125aa)
id=14626886 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14626886 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

12414..14810
DNA (2397bp) protein (799aa)
copA; Cu(2+)-binding/translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
copA; Cu(2+)-binding/translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] id=14626885 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
copA; Cu(2+)-binding/translocating P-type ATPase (EC:3.6.3.4)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

14807..15697
DNA (891bp) protein (297aa)
id=14626884 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14626884 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15747..16652)
DNA (906bp) protein (302aa)
glutamate formiminotransferase (EC:2.1.2.5); K00603 glutamate formiminotransferase [EC:2.1.2.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
glutamate formiminotransferase (EC:2.1.2.5); K00603 glutamate formiminotransferase [EC:2.1.2.5] id=14626883 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
glutamate formiminotransferase (EC:2.1.2.5)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

16909..17667
DNA (759bp) protein (253aa)
id=14626882 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14626882 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

17778..19181
DNA (1404bp) protein (468aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626881 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

19350..20627
DNA (1278bp) protein (426aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626880 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(20923..21186)
DNA (264bp) protein (88aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

21458..22477
DNA (1020bp) protein (340aa)
AIR synthase-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
AIR synthase-like protein id=14626878 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
AIR synthase-like protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

22478..24076
DNA (1599bp) protein (533aa)
ggt; gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ggt; gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] id=14626877 bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
ggt; gamma-glutamyltransferase (EC:2.3.2.2)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

24076..24570
DNA (495bp) protein (165aa)
id=14626876 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14626876 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

24570..25445
DNA (876bp) protein (292aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626875 bin=bin7_NC10_sister species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

25442..26767
DNA (1326bp) protein (442aa)
hemL; glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) (EC:5.4.3.8) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hemL; glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) (EC:5.4.3.8) id=14626874 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hemL; glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) (EC:5.4.3.8)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6395_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

26770..26988
DNA (219bp) protein (73aa)
id=14626873 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14626873 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Displaying 26 items

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