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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3..545)
DNA (543bp) protein (181aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
nth; endonuclease III (EC:4.2.99.18) id=14625396 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(557..2734)
DNA (2178bp) protein (726aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
dolichyl-phosphate-mannose-protein mannosyltransferase id=14625395 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2739..3905)
DNA (1167bp) protein (389aa)
aspartate aminotransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
aspartate aminotransferase id=14625393 bin=bin7_NC10_sister species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
aspartate aminotransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4030..4830)
DNA (801bp) protein (267aa)
glycosyl transferase family 2 protein (EC:2.4.1.-); K00729 dolichyl-phosphate beta-glucosyltransferase [EC:2.4.1.117] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
glycosyl transferase family 2 protein (EC:2.4.1.-); K00729 dolichyl-phosphate beta-glucosyltransferase [EC:2.4.1.117] id=14625392 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
glycosyl transferase family 2 protein (EC:2.4.1.-)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5120..5368
DNA (249bp) protein (83aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5624..5923
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MNR1_9FIRM
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6403..6963)
DNA (561bp) protein (187aa)
ATP--cobalamin adenosyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ATP/cobalamin adenosyltransferase id=14625390 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
ATP--cobalamin adenosyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7061..7636
DNA (576bp) protein (192aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625389 bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7648..8883)
DNA (1236bp) protein (412aa)
hypothetical protein; K03742 competence/damage-inducible protein CinA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K03742 competence/damage-inducible protein CinA id=14625388 bin=bin7_NC10_sister species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9021..10430
DNA (1410bp) protein (470aa)
RpoD family RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RpoD family RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor id=14625387 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RpoD family RNA polymerase sigma factor
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10573..11460
DNA (888bp) protein (296aa)
type 12 methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
type 12 methyltransferase id=14627564 bin=bin7_NC10_sister species=Marinobacter nanhaiticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11677..13227)
DNA (1551bp) protein (517aa)
propionyl-CoA carboxylase (EC:6.4.1.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
propionyl-CoA carboxylase (EC:6.4.1.3) id=14625386 bin=bin7_NC10_sister species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
propionyl-CoA carboxylase (EC:6.4.1.3)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(13246..13650)
DNA (405bp) protein (135aa)
DinB family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
DinB family protein id=14625385 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
DinB family protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(13789..14004)
DNA (216bp) protein (72aa)
biotin/lipoyl attachment domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
biotin/lipoyl attachment domain-containing protein id=14625384 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
acetyl-CoA carboxylase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14163..14270)
DNA (108bp) protein (36aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14400..15281)
DNA (882bp) protein (294aa)
amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein id=14625383 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
amino acid/amide ABC transporter membrane protein 1, HAAT family
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15286..16266)
DNA (981bp) protein (327aa)
amino acid/amide ABC transporter membrane protein 2, HAAT family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
amino acid/amide ABC transporter membrane protein 2, HAAT family id=14625382 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Branched-chain amino acid transport system permease protein LivM
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16270..17025)
DNA (756bp) protein (252aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
long-chain-fatty-acid--CoA ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] id=14625381 bin=bin7_NC10_sister species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
AMP-dependent synthetase and ligase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18113..18889)
DNA (777bp) protein (259aa)
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein id=14625380 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter-like protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18977..19729)
DNA (753bp) protein (251aa)
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein id=14625379 bin=bin7_NC10_sister species=Truepera radiovictrix genus=Truepera taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
ABC transporter-like protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(19733..20929)
DNA (1197bp) protein (399aa)
extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
extracellular ligand-binding receptor id=14625378 bin=bin7_NC10_sister species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
extracellular ligand-binding receptor
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(21129..22268)
DNA (1140bp) protein (380aa)
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7) id=14625377 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
DNA polymerase IV (EC:2.7.7.7)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(22527..23006)
DNA (480bp) protein (160aa)
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
metal dependent phosphohydrolase id=14625376 bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
metal dependent phosphohydrolase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(23106..23288)
DNA (183bp) protein (61aa)
excisionase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
excisionase id=14625375 bin=bin7_NC10_sister species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_25
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(23353..24024)
DNA (672bp) protein (224aa)
cysE; serine acetyltransferase (EC:2.3.1.30) id=14625374 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
cysE; serine acetyltransferase (EC:2.3.1.30) Tax=CSP1_6_Rokubacteria
cysE; serine acetyltransferase (EC:2.3.1.30)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(24017..24421)
DNA (405bp) protein (135aa)
NifU domain-containing protein; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
nifU; FeS cluster assembly scaffold protein NifU; K04488 nitrogen fixation protein NifU and related proteins id=14625373 bin=bin7_NC10_sister species=Oscillibacter sp. 1-3 genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
NifU domain-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(24418..25575)
DNA (1158bp) protein (386aa)
class V aminotransferase; K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
class V aminotransferase; K04487 cysteine desulfurase [EC:2.8.1.7] id=14625372 bin=bin7_NC10_sister species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
cysteine desulfurase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

25655..25978
DNA (324bp) protein (108aa)
hypothetical protein id=14625371 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_29
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

25989..26348
DNA (360bp) protein (120aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625370 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_1644_30
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

26348..26575
DNA (228bp) protein (76aa)
id=14625369 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14625369 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Displaying items 1-30 of 92 in total

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