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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3..455
DNA (453bp) protein (151aa)
hypothetical protein
Putative hydrolase or acyltransferase of alpha/beta superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative hydrolase or acyltransferase of alpha/beta superfamily id=2767977 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. WSM471 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

452..1648
DNA (1197bp) protein (399aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Fosmidomycin resistance protein id=4947488 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily MFS_1
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1758..2837)
DNA (1080bp) protein (360aa)
GTP-binding protein YchF; K06942 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Translation-associated GTPase id=3741100 bin=GWF2_Methylomirabilis_70_14 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GTP-binding protein YchF
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2841..4130)
DNA (1290bp) protein (430aa)
rhlE; ATP-dependent RNA helicase RhlE (EC:3.6.1.-); K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=4400730 bin=GWF2_Methylomirabilis_70_14 species=uncultured Aminicenantes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DEAD/DEAH box helicase domain protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4336..5085)
DNA (750bp) protein (250aa)
hypothetical protein; K07090 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K07090 id=14627510 bin=bin7_NC10_sister species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5095..5307)
DNA (213bp) protein (71aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5304..5579)
DNA (276bp) protein (92aa)
carbon monoxide dehydrogenase subunit G; K09386 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
carbon monoxide dehydrogenase subunit G; K09386 hypothetical protein id=14627509 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
carbon monoxide dehydrogenase subunit G
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5766..6791)
DNA (1026bp) protein (342aa)
GTPase or GTP-binding protein; K06947 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
GTPase or GTP-binding protein; K06947 id=14627508 bin=bin7_NC10_sister species=Methanopyrus kandleri genus=Methanopyrus taxon_order=Methanopyrales taxon_class=Methanopyri phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
GTPase or GTP-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6788..7978)
DNA (1191bp) protein (397aa)
aatA; aspartate aminotransferase A (AspAT) (EC:2.6.1.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
aatA; aspartate aminotransferase A (AspAT) (EC:2.6.1.1) id=14627507 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
aatA; aspartate aminotransferase A (AspAT) (EC:2.6.1.1)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(7987..8472)
DNA (486bp) protein (162aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] id=14627506 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=CSP1_6_Rokubacteria
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_11
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(8500..9054)
DNA (555bp) protein (185aa)
RsmD family RNA methyltransferase Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
methyltransferase id=14627505 bin=bin7_NC10_sister species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
RsmD family RNA methyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9051..10064)
DNA (1014bp) protein (338aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627504 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10889..12232)
DNA (1344bp) protein (448aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] id=14627503 bin=bin7_NC10_sister species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
recG; ATP-dependent DNA helicase RecG
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_14
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists


12933..13124
DNA (192bp) protein (64aa)
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=14627010 bin=bin7_NC10_sister species=Xylanimonas cellulosilytica genus=Xylanimonas taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
50S ribosomal protein L28
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(13387..14433)
DNA (1047bp) protein (349aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627009 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_16
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(14540..14917)
DNA (378bp) protein (126aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14627008 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14917..15546)
DNA (630bp) protein (210aa)
relA; GTP pyrophosphokinase (EC:2.7.6.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
relA; GTP pyrophosphokinase (EC:2.7.6.5) id=14627007 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
relA; GTP pyrophosphokinase (EC:2.7.6.5)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15992..17110
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q968_9FIRM
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17014..17961)
DNA (948bp) protein (316aa)
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=14627006 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
secF; preprotein translocase subunit SecF
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17966..19585)
DNA (1620bp) protein (540aa)
protein translocase subunit; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
protein translocase subunit; K03072 preprotein translocase subunit SecD id=14627005 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
protein translocase subunit
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_21
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(19594..19938)
DNA (345bp) protein (115aa)
yajC; Preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
yajC; Preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC id=14627004 bin=bin7_NC10_sister species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=bin7_NC10_sister organism_group=NC10
yajC; preprotein translocase subunit YajC
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(19940..21088)
DNA (1149bp) protein (383aa)
tgt; tRNA-guanine transglycosylase (queuine/archaeosine tRNA-ribosyltransferase) (EC:2.4.2.29) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
tgt; tRNA-guanine transglycosylase (queuine/archaeosine tRNA-ribosyltransferase) (EC:2.4.2.29) id=14627003 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
tgt; tRNA-guanine transglycosylase (queuine/archaeosine tRNA-ribosyltransferase) (EC:2.4.2.29)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(21227..22264)
DNA (1038bp) protein (346aa)
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] id=14627002 bin=bin7_NC10_sister species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin7_NC10_sister organism_group=NC10
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_24
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(22411..22665)
DNA (255bp) protein (85aa)
Tfp pilus assembly protein PilF Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Tfp pilus assembly protein PilF id=14627001 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

23080..23790
DNA (711bp) protein (237aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(23665..24159)
DNA (495bp) protein (165aa)
id=14627000 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14627000 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(24494..24823)
DNA (330bp) protein (110aa)
protein secretion chaperonine; K06878 tRNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
protein secretion chaperonine; K06878 tRNA-binding protein id=14626999 bin=bin7_NC10_sister species=Coprothermobacter platensis genus=Coprothermobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(24820..25872)
DNA (1053bp) protein (351aa)
stage II sporulation-like protein; K06381 stage II sporulation protein D Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
stage II sporulation-like protein; K06381 stage II sporulation protein D id=14626998 bin=bin7_NC10_sister species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
cell division protein, SpoIID family
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_29
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(26037..26273)
DNA (237bp) protein (79aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626997 bin=bin7_NC10_sister species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8010_30
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(26287..26832)
DNA (546bp) protein (182aa)
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] id=14626996 bin=bin7_NC10_sister species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ruvB; Holliday junction DNA helicase RuvB
Displaying 30 items

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