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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_42568

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_42568_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1..324)
DNA (324bp) protein (108aa)
id=4870785 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=4870785 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_42568_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(308..733)
DNA (426bp) protein (142aa)
holo-acyl-carrier-protein synthase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Holo-[acyl-carrier-protein] synthase id=4773676 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
holo-acyl-carrier-protein synthase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_42568_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(858..2222)
DNA (1365bp) protein (455aa)
glmM; phosphoglucosamine mutase; K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Phosphoglucosamine mutase id=4870787 bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glmM; phosphoglucosamine mutase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_42568_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2233..2955)
DNA (723bp) protein (241aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=4870789 bin=GWC2_Methylomirabilis_70_24 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_42568_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2952..4961)
DNA (2010bp) protein (670aa)
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH id=2610206 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_42568_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5182..5406
DNA (225bp) protein (75aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_42568_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5413..5619
DNA (207bp) protein (69aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_42568_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5739..6275)
DNA (537bp) protein (179aa)
hprT; hypoxanthine-guanine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hprT; hypoxanthine-guanine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] id=14628007 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hprT; hypoxanthine-guanine phosphoribosyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_42568_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6288..6953)
DNA (666bp) protein (222aa)
sporulation-like repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
sporulation-like repeat-containing protein id=14628008 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
sporulation-like repeat-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_42568_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists


comp(6953..8608)
DNA (1656bp) protein (552aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
argS; arginyl-tRNA synthetase (EC:6.1.1.19) id=14628009 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_42568_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8679..8867)
DNA (189bp) protein (63aa)
id=14628010 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14628010 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_42568_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8931..10451)
DNA (1521bp) protein (507aa)
cbiP; adenosylcobyric acid synthase (glutamine-hydrolyzing) (EC:6.3.5.10); K02232 adenosylcobyric acid synthase [EC:6.3.5.10] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
cbiP; adenosylcobyric acid synthase (EC:6.3.5.10)
Cobyric acid synthase id=4673920 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_42568_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10448..11371)
DNA (924bp) protein (308aa)
cbiB; cobalamin biosynthesis protein CbiB; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
cobalamin biosynthesis protein CobD; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] id=14628011 bin=bin7_NC10_sister species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
cbiB; cobalamin biosynthesis protein CbiB
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_42568_14
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(11368..11724)
DNA (357bp) protein (119aa)
TonB family protein; K03832 periplasmic protein TonB Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
TonB family protein id=2810447 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TonB family protein
Displaying 14 items

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