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RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_1
R_WOR_1_46_20, WOR-1, Bacteria

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290..1630
DNA (1341bp) protein (447aa)
DNA repair protein radA n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K702_9FIRM
DNA repair protein RadA Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
DNA repair protein RadA
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_2
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(1693..2946)
DNA (1254bp) protein (418aa)
3-isopropylmalate dehydratase (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
3-isopropylmalate dehydratase (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AZY9_SYNWW
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_3
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(2948..3862)
DNA (915bp) protein (305aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_4
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

3929..4711
DNA (783bp) protein (261aa)
ribonuclease 3; K03685 ribonuclease III [EC:3.1.26.3] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ribonuclease III n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI0003600E31
ribonuclease 3
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_5
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

4711..6000
DNA (1290bp) protein (430aa)
dihydroorotase, multifunctional complex type (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
pyrC; Dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LTX0_TEPAE
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_6
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

5981..6598
DNA (618bp) protein (206aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein id=24458788 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_7
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

6617..7597
DNA (981bp) protein (327aa)
Sodium/calcium exchanger membrane region n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZHN8_9PROT
sodium/calcium exchanger membrane region; K07301 inner membrane protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
sodium/calcium exchanger membrane region
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_8
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

7804..8217
DNA (414bp) protein (138aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_9
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

8214..9365
DNA (1152bp) protein (384aa)
secretion type II protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
type II and III secretion system protein id=24455930 bin=RBG_19FT_COMBO_GAL15_69_19 species=Phascolarctobacterium sp. CAG:266 genus=Phascolarctobacterium taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
type II and III secretion system protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_10
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(9375..10100)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BHX0_DEHSV
hypothetical protein; K09740 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ApbE family lipoprotein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_11
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(10100..10735)
DNA (636bp) protein (212aa)
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19) Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase id=1702999 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_12
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(10732..11775)
DNA (1044bp) protein (348aa)
Holliday junction DNA helicase subunit RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Caloramator australicus RC3 RepID=I7LIA5_9CLOT
Holliday junction DNA helicase subunit RuvB
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_13
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(11768..13765)
DNA (1998bp) protein (666aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Lytic transglycosylase catalytic id=3179934 bin=GWF2_OP9-related_38_17 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_14
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

13800..16082
DNA (2283bp) protein (761aa)
1,4-alpha-glucan branching protein; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=planctomycete KSU-1 RepID=I3IMF6_9PLAN
1,4-alpha-glucan branching protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_15
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

16079..18586
DNA (2508bp) protein (836aa)
nucleotidyltransferase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Nucleotidyl transferase id=4834345 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
nucleotidyltransferase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_16
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

18583..19989
DNA (1407bp) protein (469aa)
glgA; glycogen synthase GlgA (EC:2.4.1.21) Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
glgA; glycogen synthase GlgA (EC:2.4.1.21)
Glycogen synthase id=1750267 bin=GWE2_RBX1_39_32 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_17
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

20053..20283
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B60E94
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_18
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

20280..22712
DNA (2433bp) protein (811aa)
glycoside hydrolase family protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
glycoside hydrolase protein id=14426484 bin=bin1_lowGC species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
glycoside hydrolase family protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_19
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

22712..24217
DNA (1506bp) protein (502aa)
4-alpha-glucanotransferase (EC:2.4.1.25); K00705 4-alpha-glucanotransferase [EC:2.4.1.25] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase id=1754918 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_20
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

24218..25030
DNA (813bp) protein (271aa)
hemolysin; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Hemolysin n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q894H1_CLOTE
hemolysin
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_21
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

25030..25560
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DU92_DESRL
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_22
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

25571..26332
DNA (762bp) protein (254aa)
NAD(+) kinase (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
NAD(+) kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRU5_ACEAZ
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_23
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(26329..26547)
DNA (219bp) protein (73aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_24
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(26558..26752)
DNA (195bp) protein (65aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_25
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(26837..27781)
DNA (945bp) protein (315aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_26
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(27842..29617)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FGS2_DESAA
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_27
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

29694..30716
DNA (1023bp) protein (341aa)
prkC; serine/threonine-protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Serine/threonine-protein kinase n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DLN8_9BACL
prkC; serine/threonine-protein kinase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_28
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

30721..31299
DNA (579bp) protein (193aa)
serine/threonine protein kinase with PASTA sensor(s); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
serine/threonine protein kinase with PASTA sensor(s); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] id=24608946 bin=RAAC11 species=Pseudoramibacter alactolyticus genus=Pseudoramibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
serine/threonine protein kinase with PASTA sensor(s)
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_29
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

31290..31964
DNA (675bp) protein (225aa)
ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Bacillus cereus BAG3O-1 RepID=R8V4V5_BACCE
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_321_30
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

31965..33059
DNA (1095bp) protein (365aa)
riboflavin biosynthesis protein RibD; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] Tax=RIFCSPLOWO2_02_FULL_W
Riboflavin biosynthesis protein RibD n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMW4_9FIRM
riboflavin biosynthesis protein RibD
Displaying items 1-30 of 54 in total

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