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RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_1
R_WOR_1_46_20, WOR-1, Bacteria

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2..598
DNA (597bp) protein (199aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Phascolarctobacterium sp. CAG:266 RepID=R6IAX4_9FIRM
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_2
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

615..1919
DNA (1305bp) protein (435aa)
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=planctomycete KSU-1 RepID=I3IPQ1_9PLAN
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_3
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

1919..2185
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z6P6_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_4
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

2185..2787
DNA (603bp) protein (201aa)
lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=LSPA_HALOH
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_5
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

2817..3509
DNA (693bp) protein (231aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Prolipoprotein diacylglyceryl transferase id=2850938 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
prolipoprotein diacylglyceryl transferase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_6
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(3531..4250)
DNA (720bp) protein (240aa)
hypothetical protein; K07090 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein; K07090 id=5085126 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_trna_4
unknown

Not on your lists

comp(4380..4467)
DNA (88bp)
transferRNA
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_trna_3
unknown

Not on your lists

comp(4489..4575)
DNA (87bp)
transferRNA
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_trna_2
unknown

Not on your lists

comp(4583..4656)
DNA (74bp)
transferRNA
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_7
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

4685..6076
DNA (1392bp) protein (464aa)
Phosphomannomutase n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TM45_9CYAN
phosphomannomutase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
phosphomannomutase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_8
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

6078..6641
DNA (564bp) protein (188aa)
uracil phosphoribosyltransferase; K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
PyrR bifunctional protein (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YFH7_DICT6
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_9
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

6733..9660
DNA (2928bp) protein (976aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein id=14430231 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_10
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

9685..10773
DNA (1089bp) protein (363aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
putative DNA recombination protein; K09760 DNA recombination protein RmuC id=5094033 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_11
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

10775..11575
DNA (801bp) protein (267aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_12
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

11651..12457
DNA (807bp) protein (269aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_13
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(12520..13236)
DNA (717bp) protein (239aa)
hypothetical protein; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI0003641144
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_14
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(13229..14296)
DNA (1068bp) protein (356aa)
chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Chaperone protein DnaJ id=1792074 bin=GWD2_RBX1-related_39_127 species=Bacillus smithii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
chaperone protein DnaJ
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_15
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(14297..16192)
DNA (1896bp) protein (632aa)
Molecular chaperone DnaK Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) id=14625666 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Molecular chaperone DnaK
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_16
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(16194..16688)
DNA (495bp) protein (165aa)
Protein GrpE n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TAD6_HELMI
grpE; co-chaperone grpe; K03687 molecular chaperone GrpE Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
grpE; co-chaperone grpe
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_17
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(16688..17437)
DNA (750bp) protein (250aa)
hrcA; heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Heat-inducible transcription repressor HrcA id=1812879 bin=GWA2_OP3_53_43 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hrcA; heat-inducible transcription repressor HrcA
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_18
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(17522..18595)
DNA (1074bp) protein (358aa)
coproporphyrinogen III oxidase, anaerobic (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
coproporphyrinogen III oxidase, anaerobic (EC:1.3.99.22)
Coproporphyrinogen III oxidase, anaerobic n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RKX7_MOOTA
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_19
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(18592..20373)
DNA (1782bp) protein (594aa)
GTP-binding protein LepA n=1 Tax=Paenibacillus sp. JC66 RepID=UPI00028960DF
GTP-binding protein LepA Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
elongation factor 4
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_20
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

20433..22151
DNA (1719bp) protein (573aa)
S-layer protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Tetratricopeptide TPR_1 repeat-containing protein id=2143561 bin=GWD2_RBX1-related_39_127 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
S-layer protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_21
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

22155..22490
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0003083269
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
histidine triad (HIT) protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_22
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(22494..25322)
DNA (2829bp) protein (943aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_23
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists


25402..25956
DNA (555bp) protein (185aa)
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=2 Tax=Clostridium difficile RepID=T4ALU3_CLODI
rph; ribonuclease Ph Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_trna_1
unknown

Not on your lists

25969..26041
DNA (73bp)
transferRNA
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_24
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

26078..27559
DNA (1482bp) protein (494aa)
homospermidine synthase (EC:2.5.1.44); K00808 homospermidine synthase [EC:2.5.1.44] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
homospermidine synthase (EC:2.5.1.44)
homospermidine synthase, partial n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5765B
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2931_25
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

27556..28704
DNA (1149bp) protein (383aa)
Orn/DAP/Arg decarboxylase 2; K01581 ornithine decarboxylase [EC:4.1.1.17] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
decarboxylase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B7565F
Orn/DAP/Arg decarboxylase 2
Displaying 29 items

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