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RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_1
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(3..779)
DNA (777bp) protein (259aa)
fadA; fatty acid oxidation complex, beta subunit FadA; K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
3-ketoacyl-CoA thiolase, Acetyl-CoA acetyltransferase (EC:2.3.1.9 2.3.1.16)
3-ketoacyl-CoA thiolase, Acetyl-CoA acetyltransferase n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WJJ2_9SPIO
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_2
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(776..2560)
DNA (1785bp) protein (595aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
AMP-dependent synthetase and ligase n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SXW0_PSYIN
AMP-dependent synthetase and ligase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_3
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

2622..3434
DNA (813bp) protein (271aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein id=17460269 bin=RBG_16_Aminicenantes_63_14 species=Thermofilum sp. 1910b genus=Thermofilum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_4
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

3532..4131
DNA (600bp) protein (200aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_5
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(4136..4732)
DNA (597bp) protein (199aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_6
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(4725..5252)
DNA (528bp) protein (176aa)
adenine phosphoribosyltransferase; K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Adenine phosphoribosyltransferase id=2100960 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
adenine phosphoribosyltransferase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_7
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(5252..5986)
DNA (735bp) protein (245aa)
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
S-methyl-5'-thioadenosine phosphorylase id=2100959 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=Mammalia phylum=Chordata tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
methylthioadenosine phosphorylase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_8
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(5994..6995)
DNA (1002bp) protein (334aa)
ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z6Y6_MELRP
ADP-L-glycero-D-manno-heptose-6-epimerase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ADP-L-glycero-D-manno-heptose-6-epimerase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_9
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(6956..7999)
DNA (1044bp) protein (348aa)
deoxyhypusine synthase-like protein; K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
deoxyhypusine synthase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5A4EF
deoxyhypusine synthase-like protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_10
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(8005..8505)
DNA (501bp) protein (167aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_11
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

8773..9132
DNA (360bp) protein (120aa)
Single-stranded DNA-binding protein n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L8F6_9BACI
single-strand binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
single-strand binding protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_12
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

9206..9856
DNA (651bp) protein (217aa)
Nitroreductase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YA56_DICT6
nitroreductase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
nitroreductase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_13
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

9853..10743
DNA (891bp) protein (297aa)
Cell envelope-related transcriptional attenuator, LytR domain n=1 Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=B1XNJ4_SYNP2
cell envelope-related function transcriptional attenuator Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
cell envelope-related function transcriptional attenuator
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_14
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

10745..10984
DNA (240bp) protein (80aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_15
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

10984..12111
DNA (1128bp) protein (376aa)
peptidase, M50 family protein (EC:3.4.24.-) Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
M50 family peptidase (EC:3.4.24.-)
Zn-dependent protease id=4804944 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_16
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

12124..12642
DNA (519bp) protein (173aa)
ThiJ/PfpI domain-containing protein; K05520 protease I [EC:3.2.-.-] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ThiJ/PfpI domain-containing protein id=1714297 bin=GWB2_Elusimicrobia_63_16 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
ThiJ/PfpI domain-containing protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_17
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

12639..13037
DNA (399bp) protein (133aa)
Ribonuclease H n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S2S1_THEOJ
ribonuclease H Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ribonuclease H
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_18
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

13559..13813
DNA (255bp) protein (85aa)
excinuclease ABC C subunit domain-containing protein; K07461 putative endonuclease Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Excinuclease ABC C subunit domain protein id=5024943 bin=GWA2_CPR4_42_17 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
GIY-YIG catalytic protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_19
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(13966..14169)
DNA (204bp) protein (68aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_20
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(14266..16992)
DNA (2727bp) protein (909aa)
id=2121646 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
id=2121646 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_21
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

17060..17692
DNA (633bp) protein (211aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_22
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(17707..20886)
DNA (3180bp) protein (1060aa)
carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Carbamoyl-phosphate synthase large chain n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF49_GEOUR
carbamoyl-phosphate synthase large subunit
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_23
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(20870..22000)
DNA (1131bp) protein (377aa)
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5) Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain id=4368724 bin=GWC2_Deltaproteobacteria_42_51 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_24
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(22063..24831)
DNA (2769bp) protein (923aa)
UPF0182 protein Acear_1298 n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QQM0_ACEAZ
hypothetical protein; K09118 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_25
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

24899..26098
DNA (1200bp) protein (400aa)
sodium/hydrogen exchanger Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
sodium/hydrogen exchanger id=5097001 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
sodium/hydrogen exchanger
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_26
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(26101..27126)
DNA (1026bp) protein (342aa)
decarboxylase; K06966 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Putative uncharacterized protein id=4482162 bin=GWF2_Lentisphaerae_50_93 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Rossmann fold nucleotide-binding protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_27
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(27116..27907)
DNA (792bp) protein (264aa)
ispE; putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GS66_SELRL
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_28
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists


comp(27897..28157)
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CNY3_SYNLT
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
30S ribosomal protein S20
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_29
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

28250..29131
DNA (882bp) protein (294aa)
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta id=1860179 bin=GWE2_RBX1_39_32 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_235_30
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

29157..30137
DNA (981bp) protein (327aa)
accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PDG9_DEFDS
Displaying items 1-30 of 76 in total

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