ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

256..1392
DNA (1137bp) protein (379aa)
ntrX; two component signal transduction response regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
sigma-54 dependent transcriptional regulator id=12557439 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1396..1818)
DNA (423bp) protein (141aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2240..3022
DNA (783bp) protein (261aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3180..3500
DNA (321bp) protein (107aa)
UDP-glucuronate 4-epimerase (EC:5.1.3.6) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
UDP-glucuronate 4-epimerase (EC:5.1.3.6)
UDP-glucuronate 4-epimerase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIA3_DESK7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3500..3850
DNA (351bp) protein (117aa)
UDP-glucuronate 4-epimerase (EC:5.1.3.6) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
UDP-glucuronate 4-epimerase (EC:5.1.3.6)
Putative NAD-binding domain 4 protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R7C6_9THEO
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3930..4193
DNA (264bp) protein (88aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4181..4630
DNA (450bp) protein (150aa)
Ribonuclease VapC n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FYS3_9DELT
Ribonuclease VapC Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5012..5413
DNA (402bp) protein (134aa)
UDP-glucuronate 4-epimerase (EC:5.1.3.6) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
UDP-glucuronate 4-epimerase (EC:5.1.3.6)
Putative NAD-binding domain 4 protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R7C6_9THEO
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5730..5999)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034AEB61
addiction module antidote protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
addiction module antidote protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6146..6490)
DNA (345bp) protein (115aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6483..6722)
DNA (240bp) protein (80aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6782..7009)
DNA (228bp) protein (76aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase RmlC n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BNP6_9GAMM
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7238..7357)
DNA (120bp) protein (40aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7373..7786)
DNA (414bp) protein (138aa)
hypothetical protein; K07065 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein; K07065 id=14630836 bin=bin9_gal15 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7977..8315
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4P5_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8599..9285)
DNA (687bp) protein (229aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_27137_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9583..10230
DNA (648bp) protein (216aa)
id=12556198 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
id=12556198 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Displaying 17 items

View Taxonomy