ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_23315_4

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 4163..4741

Top 3 Functional Annotations

Value Algorithm Source
Membrane or secreted protein containing Prepilin-type cleavage/methylation, N-terminal domain n=1 Tax=sediment metagenome RepID=D9PMY9_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 208.0
  • Bit_score: 169
  • Evalue 4.00e-39
pilin, type IV Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 353
  • Evalue 1.60e-94
pilin, type IV similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 175.0
  • Bit_score: 104
  • Evalue 4.40e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGAAGATGCGTGACTCCAAGGGTTTCACCCTCATCGAGCTGCTGATCGTCGTGGCGATCATCGGCATCATCGCGGCGATCGCGATTCCTGGTCTTCTGCGTGCCCGTATGTCGGGTAACGAGGCGTCGGCGATTGGCTCGCTCCGCGCCATCAACAGCGGCGAGGCGGCTTTCTCGTCGGCCTGCGGGCGTGGCGGGTATGCGACGACGCTGGTTCAGCTGTTTnnnnnnnnnnnnnnnnnnnnnnnnCTGGTTCAGCTGTTTGCGCCGCCGACGGCCGGCGGGTCGGGGTTCATCAGCCCAGATCTCGCCACCGACCCCAGCGTCAAGAGCGGCTACACGATCTCGTTGGCCGTGGGCACGACGAACACGATCGTGGCGGCTCAGGCTCTGACGTGCAGCAACAACGCGGACGCGTTGGCGACGTATTTCTCCGCCGCGTCCCCGACGGCGTTCGGCGGCACGGGAACACGTCACTTTGGGACCGACGCGCGCGGCACGATCTTCCAGGACACGGCGGACGTTCCTCTGACGGCGGCCACGCTGGCCACGGCCGGCACCATCAGCCCGGCTCAGTAG
PROTEIN sequence
Length: 193
MKMRDSKGFTLIELLIVVAIIGIIAAIAIPGLLRARMSGNEASAIGSLRAINSGEAAFSSACGRGGYATTLVQLFXXXXXXXXLVQLFAPPTAGGSGFISPDLATDPSVKSGYTISLAVGTTNTIVAAQALTCSNNADALATYFSAASPTAFGGTGTRHFGTDARGTIFQDTADVPLTAATLATAGTISPAQ*