ggKbase home page

RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..146)
DNA (144bp) protein (48aa)
FAD dependent oxidoreductase (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TDA5_ACIDE
FAD dependent oxidoreductase; K07137 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
FAD dependent oxidoreductase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(246..1163)
DNA (918bp) protein (306aa)
cysteine synthase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
cysteine synthase id=12551166 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cysteine synthase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1346..1954)
DNA (609bp) protein (203aa)
methyltransferase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
methyltransferase id=12551167 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
methyltransferase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2420..3607)
DNA (1188bp) protein (396aa)
peptidase M48, Ste24p Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
peptidase M48, Ste24p id=12551168 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
peptidase M48, Ste24p
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3678..4922)
DNA (1245bp) protein (415aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12551170 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5198..5983)
DNA (786bp) protein (262aa)
RNA-binding protein S4 n=1 Tax=Acidovorax radicis RepID=UPI0002375889
RNA-binding s4 domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
RNA-binding s4 domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5976..7676)
DNA (1701bp) protein (567aa)
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
beta-lactamase domain-containing protein id=12551172 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
beta-lactamase domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7654..8946)
DNA (1293bp) protein (431aa)
Monooxygenase FAD-binding (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T879_ACIDE
monooxygenase FAD-binding protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
monooxygenase FAD-binding protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9006..9593
DNA (588bp) protein (196aa)
regulatory protein MarR Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
regulatory protein MarR id=12551174 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
regulatory protein MarR
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9660..10652
DNA (993bp) protein (331aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12551175 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10914..11618)
DNA (705bp) protein (235aa)
glutathione S-transferase domain-containing protein; K11209 GST-like protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
glutathione S-transferase domain-containing protein; K11209 GST-like protein id=12551176 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
glutathione S-transferase domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11712..12590
DNA (879bp) protein (293aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
dapF; diaminopimelate epimerase (EC:5.1.1.7) id=12551177 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
dapF; diaminopimelate epimerase (EC:5.1.1.7)
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12587..13276
DNA (690bp) protein (230aa)
hypothetical protein id=12551178 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13375..14328
DNA (954bp) protein (318aa)
phage integrase family protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
phage integrase family protein id=12551179 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
phage integrase family protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14383..14769
DNA (387bp) protein (129aa)
id=12551180 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
id=12551180 bin=BDI tax=BDI organism_group=Betaproteobacteria
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14950..17229
DNA (2280bp) protein (760aa)
tonb-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
tonb-dependent receptor; K02014 iron complex outermembrane recepter protein id=12551181 bin=BDI species=Thioalkalivibrio thiocyanodenitrificans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
tonb-dependent receptor
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17239..17664
DNA (426bp) protein (142aa)
exbB3; biopolymer transport protein Exbb; K03561 biopolymer transport protein ExbB Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Biopolymer transport protein exbB id=1270152 bin=GWE1_Burkholderiales_65_30 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
exbB3; biopolymer transport protein Exbb
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17667..18035
DNA (369bp) protein (123aa)
exbD; biopolymer transport protein ExbD; K03559 biopolymer transport protein ExbD Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
exbD; biopolymer transport protein ExbD; K03559 biopolymer transport protein ExbD id=12551183 bin=BDI species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=BDI organism_group=Betaproteobacteria
exbD; biopolymer transport protein ExbD
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18032..18763
DNA (732bp) protein (244aa)
tonB; TonB-dependent receptor; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Ferric siderophore transport system, periplasmic binding protein TonB id=12551184 bin=BDI species=uncultured Desulfofustis sp. PB-SRB1 genus=Desulfofustis taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
tonB; TonB-dependent receptor
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18765..22922
DNA (4158bp) protein (1386aa)
cobN; cobaltochelatase subunit CobN (EC:6.6.1.2); K02230 cobaltochelatase CobN [EC:6.6.1.2] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
cobN; cobaltochelatase subunit CobN (EC:6.6.1.2)
CobN/magnesium chelatase id=1270155 bin=GWE1_Burkholderiales_65_30 species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22919..23470
DNA (552bp) protein (184aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12551186 bin=BDI species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23463..23816
DNA (354bp) protein (118aa)
hypothetical protein id=12551187 bin=BDI species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23820..25067
DNA (1248bp) protein (416aa)
sam-dependent methyltransferase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
sam-dependent methyltransferase id=12551188 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
sam-dependent methyltransferase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25266..26363
DNA (1098bp) protein (366aa)
cobalamin synthesis protein, P47K Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
cobalamin synthesis protein, P47K id=12551189 bin=BDI species=Acidovorax citrulli genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cobalamin synthesis protein, P47K
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26544..27296
DNA (753bp) protein (251aa)
TraR/DksA family transcriptional regulator id=12551190 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
TraR/DksA family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
TraR/DksA family transcriptional regulator
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27345..29126
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T627_ACIDE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29154..29747
DNA (594bp) protein (198aa)
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ATP-dependent protease HslVU, peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] id=12551192 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ATP-dependent protease peptidase subunit
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29828..31150
DNA (1323bp) protein (441aa)
hslU; ATP-dependent protease ATP-binding subunit HslU id=12551193 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hslU; ATP-dependent protease ATP-binding subunit HslU Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hslU; ATP-dependent protease ATP-binding subunit HslU
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_29
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31569..31856
DNA (288bp) protein (96aa)
cell division protein MraZ; K03925 MraZ protein id=12551194 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cell division protein MraZ; K03925 MraZ protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
cell division protein mraz
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_367_30
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31865..32797
DNA (933bp) protein (311aa)
16S rRNA m(4)C1402 methyltransferase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
16S rRNA m(4)C1402 methyltransferase id=12551195 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
16S rRNA m(4)C1402 methyltransferase
Displaying items 1-30 of 89 in total

View Taxonomy