ggKbase home page

RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_1
unknown

Not on your lists

comp(1..60)
DNA (60bp) protein (20aa)

This feature has no annotations

RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_2
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(88..306)
DNA (219bp) protein (73aa)
translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Translation initiation factor IF-1 id=3762491 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
translation initiation factor IF-1
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_3
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(293..1072)
DNA (780bp) protein (260aa)
methionine aminopeptidase, type I; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Methionine aminopeptidase id=3762490 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
methionine aminopeptidase, type I
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_4
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(1081..1758)
DNA (678bp) protein (226aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Adenylate kinase id=4561089 bin=GWA2_Elusi_like_61_42 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
adenylate kinase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_5
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(1775..3106)
DNA (1332bp) protein (444aa)
protein translocase subunit SecY ; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Protein translocase subunit SecY id=3762488 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
protein translocase subunit SecY
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_6
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(3100..3591)
DNA (492bp) protein (164aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
50S ribosomal protein L15 id=3436640 bin=GWC2_Elusimicrobia_64_44 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
50S ribosomal protein L15
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_7
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(3588..4163)
DNA (576bp) protein (192aa)
30S ribosomal protein S5 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
30S ribosomal protein S5 id=1700242 bin=GWB2_Elusimicrobia_63_16 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
30S ribosomal protein S5
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_8
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(4167..4529)
DNA (363bp) protein (121aa)
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
50S ribosomal protein L18 id=4677541 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
rplR; 50S ribosomal protein L18
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_9
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(4529..5083)
DNA (555bp) protein (185aa)
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
50S ribosomal protein L6 id=3598343 bin=GWC2_Elusimicrobia_51_8 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
50S ribosomal protein L6
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_10
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(5106..5498)
DNA (393bp) protein (131aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
30S ribosomal protein S8 id=4607831 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
30S ribosomal protein S8
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_11
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(5540..5725)
DNA (186bp) protein (62aa)
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
30S ribosomal protein S14 type Z id=3762401 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
30S ribosomal protein S14
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_12
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(5734..6339)
DNA (606bp) protein (202aa)
50S ribosomal protein L5 ; K02931 large subunit ribosomal protein L5 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
50S ribosomal protein L5 id=4607829 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
50S ribosomal protein L5
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_13
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(6336..6647)
DNA (312bp) protein (104aa)
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
50S ribosomal protein L24 id=4677546 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
50S ribosomal protein L24
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_14
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(6667..7032)
DNA (366bp) protein (122aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
50S ribosomal protein L14 id=4560980 bin=GWA2_Elusi_like_61_42 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
50S ribosomal protein L14
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_15
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(7042..7344)
DNA (303bp) protein (101aa)
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
probable 30S ribosomal protein S17 id=3762392 bin=GWA2_Elusimicrobia_69_24 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
30S ribosomal protein S17
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_16
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(7357..7551)
DNA (195bp) protein (65aa)
50S ribosomal protein L29 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
50S ribosomal protein L29 id=3762389 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_17
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(7574..7996)
DNA (423bp) protein (141aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
50S ribosomal protein L16 id=2183490 bin=GWB2_Elusimicrobium_63_22 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
rplP; 50S ribosomal protein L16
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_18
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(8012..8914)
DNA (903bp) protein (301aa)
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
30S ribosomal protein S3 id=3762385 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
30S ribosomal protein S3
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_19
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(8939..9286)
DNA (348bp) protein (116aa)
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
50S ribosomal protein L22 id=3762383 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
50S ribosomal protein L22
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_20
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(9290..9577)
DNA (288bp) protein (96aa)
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
30S ribosomal protein S19 id=1700255 bin=GWB2_Elusimicrobia_63_16 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
rpsS; 30S ribosomal protein S19
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_21
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(9692..10537)
DNA (846bp) protein (282aa)
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
50S ribosomal protein L2 id=4607811 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
rplB; 50S ribosomal protein L2
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_22
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(10544..10846)
DNA (303bp) protein (101aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
50S ribosomal protein L23 id=4607808 bin=GWA2_Elusimicrobia_66_18 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
rplW; 50S ribosomal protein L23
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_11287_23
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(11051..11476)
DNA (426bp) protein (142aa)
50S ribosomal protein L4P; K02926 large subunit ribosomal protein L4 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
50S ribosomal protein L4 id=4677582 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
50S ribosomal protein L4P
Displaying 23 items

View Taxonomy