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RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299

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Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_1
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(175..807)
DNA (633bp) protein (211aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(937..1872)
DNA (936bp) protein (312aa)
ornithine carbamoyltransferase; K00611 ornithine carbamoyltransferase [EC:2.1.3.3] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Ornithine carbamoyltransferase, catabolic id=3696187 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
ornithine carbamoyltransferase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(1921..2232)
DNA (312bp) protein (104aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19) Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T802_9CYAN
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(2524..6018)
DNA (3495bp) protein (1165aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0S8_DICTD
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(6098..6244)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L7L8_9BACT
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(6320..7276)
DNA (957bp) protein (319aa)
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] id=24609777 bin=RAAC11 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=RAAC11 organism_group=Unknown_CP
aspartate carbamoyltransferase (EC:2.1.3.2)
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(7345..8307)
DNA (963bp) protein (321aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(8549..9574)
DNA (1026bp) protein (342aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

9631..10509
DNA (879bp) protein (293aa)
Membrane-associated lipoprotein involved in thiamine biosynthesis n=2 Tax=Clostridium butyricum RepID=B1QUD0_CLOBU
apbE2; thiamine biosynthesis lipoprotein ApbE Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
apbE2; thiamine biosynthesis lipoprotein ApbE
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

10490..11755
DNA (1266bp) protein (422aa)
acetate kinase; K00925 acetate kinase [EC:2.7.2.1] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
propionate kinase (EC:2.7.2.15)
Acetate kinase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M601_GEODF
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

11776..12603
DNA (828bp) protein (276aa)
glucose-1-phosphate thymidylyltransferase-like protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Nucleoside-diphosphate-sugar pyrophosphorylase id=4178476 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
glucose-1-phosphate thymidylyltransferase-like protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(12612..13163)
DNA (552bp) protein (184aa)
uracil phosphoribosyltransferase (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
uracil phosphoribosyltransferase (EC:2.4.2.9)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036B1296
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(13215..14624)
DNA (1410bp) protein (470aa)
phosphomannomutase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Phosphoglucomutase/phosphomannomutase id=4659420 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
phosphomannomutase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

14687..15103
DNA (417bp) protein (139aa)
Cytidine/deoxycytidylate deaminase family protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3B7_9CLOT
Cytosine/adenosine deaminases Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Cytosine/adenosine deaminases
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(15355..17055)
DNA (1701bp) protein (567aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Tetratricopeptide TPR_1 repeat-containing protein id=2143561 bin=GWD2_RBX1-related_39_127 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
phosphoesterase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(17076..17447)
DNA (372bp) protein (124aa)
speD_2; S-adenosylmethionine decarboxylase proenzyme (EC:4.1.1.50); K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
speD_2; S-adenosylmethionine decarboxylase proenzyme (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QS05_PERMH
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

17535..18689
DNA (1155bp) protein (385aa)
tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Tryptophan synthase beta chain n=2 Tax=Geobacter metallireducens RepID=Q39SR7_GEOMG
trpB1; tryptophan synthase subunit beta
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(18700..19515)
DNA (816bp) protein (272aa)
hypothetical protein
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

19693..20460
DNA (768bp) protein (256aa)
tryptophan synthase subunit alpha; K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Tryptophan synthase alpha chain n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I0V3_CLOCE
tryptophan synthase subunit alpha
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

20478..21014
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0NA75_9CLOT
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
metal dependent phosphohydrolase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_21
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

21071..21469
DNA (399bp) protein (133aa)
7-cyano-7-deazaguanine reductase; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UV4_SOLUE
7-cyano-7-deazaguanine reductase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_22
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(21533..22309)
DNA (777bp) protein (259aa)
orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Orotidine 5'-phosphate decarboxylase id=1249781 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
orotidine 5'-phosphate decarboxylase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_23
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists


comp(22385..23767)
DNA (1383bp) protein (461aa)
hydroxymethylbutenyl pyrophosphate reductase; K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
4-hydroxy-3-methylbut-2-enyl diphosphate reductase id=2148995 bin=GWD2_RBX1-related_39_127 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hydroxymethylbutenyl pyrophosphate reductase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_24
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(24094..24699)
DNA (606bp) protein (202aa)
plsY; glycerol-3-phosphate acyltransferase PlsY (EC:2.3.1.3) Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
plsY; glycerol-3-phosphate acyltransferase PlsY (EC:2.3.1.3)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00036DFA20
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_25
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(24782..26008)
DNA (1227bp) protein (409aa)
aspartate kinase; K00928 aspartate kinase [EC:2.7.2.4] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Aspartokinase n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DT35_DESRL
aspartate kinase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_26
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(26104..27243)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Psychrobacter arcticus (strain DSM 17307 / 273-4) RepID=Q4FUQ8_PSYA2
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_27
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

27378..28484
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IGF0_9BACE
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_28
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

28494..29585
DNA (1092bp) protein (364aa)
Trypsin n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NSC7_BACSE
peptidase S1 and S6 chymotrypsin/Hap Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
peptidase S1 and S6 chymotrypsin/Hap
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_29
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists


comp(29575..30867)
DNA (1293bp) protein (431aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=SYH_HALOH
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_299_30
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

31066..32124
DNA (1059bp) protein (353aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Threonine synthase n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T3M3_THEA1
threonine synthase
Displaying items 1-30 of 43 in total

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