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RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_1253

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_1253_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

223..522
DNA (300bp) protein (100aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_1253_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(497..1909)
DNA (1413bp) protein (471aa)
glycogen/starch synthase; K00703 starch synthase [EC:2.4.1.21] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Glycogen synthase id=1808701 bin=GWD2_RBX1-related_39_127 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
glycogen/starch synthase
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_1253_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(1924..2961)
DNA (1038bp) protein (346aa)
galactose-1-phosphate uridylyltransferase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Galactose-1-phosphate uridylyltransferase id=1808698 bin=GWD2_RBX1-related_39_127 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
galactose-1-phosphate uridylyltransferase
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_1253_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2967..4841)
DNA (1875bp) protein (625aa)
alpha-amylase; K07405 alpha-amylase [EC:3.2.1.1] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Glycoside hydrolase family 57 id=2518042 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
alpha-amylase
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_1253_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(5072..5581)
DNA (510bp) protein (170aa)
NADH ubiquinone oxidoreductase, 20 kDa subunit Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
NADH ubiquinone oxidoreductase 20 kDa subunit id=4294457 bin=GWC2_Elusimicrobia_51_8 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
NADH ubiquinone oxidoreductase, 20 kDa subunit
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_1253_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(5578..7146)
DNA (1569bp) protein (523aa)
formate hydrogenlyase subunit 5 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative Formate hydrogenlyase, large subunit id=4294455 bin=GWC2_Elusimicrobia_51_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
Ni,Fe-hydrogenase III large subunit
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_1253_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(7147..8598)
DNA (1452bp) protein (484aa)
hydrogenase, membrane subunit 1-like protein (EchA-like); K12141 hydrogenase-4 component F [EC:1.-.-.-] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Strongly similar to membrane-bound [NiFe]-hydrogenase-4, subunit F id=3642133 bin=GWA2_Elusimicrobia_51_34 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
hydrogenase, membrane subunit 1-like protein (EchA-like)
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_1253_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(8600..9235)
DNA (636bp) protein (212aa)
hydrogenase 4 membrane component (E); K12140 hydrogenase-4 component E [EC:1.-.-.-] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Hydrogenase, membrane subunit 2-like protein id=3642134 bin=GWA2_Elusimicrobia_51_34 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
hydrogenase 4 membrane component (E)
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_1253_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(9240..10088)
DNA (849bp) protein (283aa)
formate hydrogenlyase subunit 4 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Formate hydrogenlyase subunit 4 id=3642135 bin=GWA2_Elusimicrobia_51_34 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
formate hydrogenlyase subunit 4
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_1253_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(10091..11923)
DNA (1833bp) protein (611aa)
NADH dehydrogenase (quinone); K12137 hydrogenase-4 component B [EC:1.-.-.-] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
NADH dehydrogenase (quinone) (EC:1.6.99.5)
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit id=4294447 bin=GWC2_Elusimicrobia_51_8 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_1253_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(12001..12408)
DNA (408bp) protein (136aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Uncharacterized protein id=24610653 bin=RAAC11 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
hypothetical protein
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_1253_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(12408..13826)
DNA (1419bp) protein (473aa)
thymidylate synthase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
thymidylate synthase id=24443597 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
thymidylate synthase
Displaying 12 items

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