ggKbase home page

RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247

Search features with annotation key words

Displaying items 1-30 of 38 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_1
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(147..4478)
DNA (4332bp) protein (1444aa)
Conserved repeat domain protein id=1859201 bin=GWB2_Ignavibacteria_35_12 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_2
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(5146..5469)
DNA (324bp) protein (108aa)
DNA polymerase beta domain protein region id=1859198 bin=GWB2_Ignavibacteria_35_12 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
DNA polymerase beta domain protein region Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(5484..5879)
DNA (396bp) protein (132aa)
UPF0332 protein TM_1000 id=1859196 bin=GWB2_Ignavibacteria_35_12 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_4
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(5866..6192)
DNA (327bp) protein (109aa)
Putative toxin-antitoxin system, toxin component id=1859194 bin=GWB2_Ignavibacteria_35_12 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Putative toxin-antitoxin system, toxin component Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(6207..6602)
DNA (396bp) protein (132aa)
UPF0332 protein TM_1000 id=1859192 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
HEPN domain protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(6592..6915)
DNA (324bp) protein (108aa)
DNA polymerase beta domain protein region id=1859190 bin=GWB2_Ignavibacteria_35_12 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
DNA polymerase beta domain protein region Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(7054..7368)
DNA (315bp) protein (105aa)
Putative uncharacterized protein id=5037732 bin=GWA2_Ignavibacteria-rel_35_8 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
DNA polymerase beta domain-containing protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
DNA polymerase beta domain-containing protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_8
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(7341..7733)
DNA (393bp) protein (131aa)
Putative uncharacterized protein id=1859186 bin=GWB2_Ignavibacteria_35_12 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
HEPN domain protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
HEPN domain-containing protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_9
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(7893..8195)
DNA (303bp) protein (101aa)
Nucleotidyltransferase domain-containing protein id=1859184 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
nucleotidyltransferase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
DNA polymerase beta domain-containing protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(8174..8560)
DNA (387bp) protein (129aa)
HEPN domain protein id=1859180 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
HEPN domain-containing protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
HEPN domain-containing protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(8611..9360)
DNA (750bp) protein (250aa)
LmbE family protein id=1859177 bin=GWB2_Ignavibacteria_35_12 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
lmbe family protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
LmbE family protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(9360..9800)
DNA (441bp) protein (147aa)
rpiB; ribose 5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Ribose 5-phosphate isomerase B id=1859101 bin=GWB2_Ignavibacteria_35_12 species=Thermosipho africanus genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
rpiB; ribose 5-phosphate isomerase B
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_13
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(10145..11401)
DNA (1257bp) protein (419aa)
serS; seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Serine--tRNA ligase id=1859096 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
serS; seryl-tRNA synthetase
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_14
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

11655..12386
DNA (732bp) protein (244aa)
Putative uncharacterized protein id=1859093 bin=GWB2_Ignavibacteria_35_12 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_15
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

12448..13236
DNA (789bp) protein (263aa)
hypothetical protein id=1859090 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_16
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

13442..13915
DNA (474bp) protein (158aa)
Transposase IS200-family protein id=1859087 bin=GWB2_Ignavibacteria_35_12 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
transposase IS200-family protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
transposase IS200-family protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_17
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

14167..15342
DNA (1176bp) protein (392aa)
Uncharacterized protein id=1859084 bin=GWB2_Ignavibacteria_35_12 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_18
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

15357..16691
DNA (1335bp) protein (445aa)
glycosyl hydrolase family 5
Glycosidase, family 5 id=1859082 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Glycosidase, family 5 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_19
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

16839..18722
DNA (1884bp) protein (628aa)
Signal transduction histidine kinase id=1859081 bin=GWB2_Ignavibacteria_35_12 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Signal transduction histidine kinase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Signal transduction histidine kinase
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_20
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

18860..19255
DNA (396bp) protein (132aa)
hypothetical protein id=1859079 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_21
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

19757..20089
DNA (333bp) protein (111aa)
RNA-binding protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
RNA-binding protein id=3927472 bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
RNA-binding protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_22
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(20442..20699)
DNA (258bp) protein (86aa)
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Putative uncharacterized protein id=2915942 bin=GWF2_Bacteroidetes_40_14 species=Yersinia pseudotuberculosis genus=Yersinia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
addiction module toxin, Txe/YoeB family
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_23
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(20696..20953)
DNA (258bp) protein (86aa)
Antitoxin of toxin-antitoxin stability system, StbD family id=1859075 bin=GWB2_Ignavibacteria_35_12 species=Thalassolituus oleivorans genus=Thalassolituus taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Phd_YefM family antitoxin Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
prevent-host-death family protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_24
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(21342..21566)
DNA (225bp) protein (75aa)
Putative uncharacterized protein id=3927470 bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_25
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(21584..21796)
DNA (213bp) protein (71aa)
Putative uncharacterized protein id=3927469 bin=GWA2_Ignavibacteria-rel_35_8 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_26
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(21793..22236)
DNA (444bp) protein (148aa)
Putative uncharacterized protein id=1859069 bin=GWB2_Ignavibacteria_35_12 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_27
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

23117..23299
DNA (183bp) protein (61aa)
Putative uncharacterized protein id=1859067 bin=GWB2_Ignavibacteria_35_12 species=uncultured archaeon GZfos33H6 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Putative uncharacterized protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_28
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

23287..23565
DNA (279bp) protein (93aa)
Putative integron gene cassette protein id=1859065 bin=GWB2_Ignavibacteria_35_12 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
plasmid stabilization system protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
plasmid stabilization system protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_29
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(23613..24026)
DNA (414bp) protein (138aa)
Putative uncharacterized protein id=3927428 bin=GWA2_Ignavibacteria-rel_35_8 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
HEPN domain-containing protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
HEPN domain-containing protein
RIFOXYC2_FULL_GWB2_Ignavibacteria_35_21_rifoxyc2_full_scaffold_1247_30
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(24010..24330)
DNA (321bp) protein (107aa)
Putative uncharacterized protein id=1859061 bin=GWB2_Ignavibacteria_35_12 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
DNA polymerase beta domain-containing protein region Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
DNA polymerase beta domain-containing protein region
Displaying items 1-30 of 38 in total

View Taxonomy