ggKbase home page

RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357

Search features with annotation key words

Displaying items 1-30 of 46 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_1
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67..984)
DNA (918bp) protein (306aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z0L6_DESAT
Fis family transcriptional regulator; K07713 two-component system, NtrC family, response regulator HydG Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Fis family transcriptional regulator
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_2
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1645..1797
DNA (153bp) protein (51aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_3
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1876..3195
DNA (1320bp) protein (440aa)
AAA ATPase central domain protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1E2_DESAT
AAA ATPase central domain protein; K07478 putative ATPase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AAA ATPase central domain protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_4
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3222..3392
DNA (171bp) protein (57aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_5
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3405..4859
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PTK2_DESSD
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4977..6878)
DNA (1902bp) protein (634aa)
Chaperone protein DnaK n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z5B5_DESAT
chaperone protein DnaK; K04043 molecular chaperone DnaK Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
chaperone protein DnaK
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_7
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6918..7463)
DNA (546bp) protein (182aa)
Protein GrpE n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NQY9_9DELT
GrpE protein; K03687 molecular chaperone GrpE Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
GrpE protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_8
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7969..8898)
DNA (930bp) protein (310aa)
DHHA2 domain protein; K15986 manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
DHHA2 domain protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1D9_DESAT
DHHA2 domain protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_9
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9262..9717
DNA (456bp) protein (152aa)
Response regulator receiver protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2G0_DESAT
response regulator receiver protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
response regulator receiver protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_10
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9740..10405
DNA (666bp) protein (222aa)
HAD superfamily hydrolase (EC:3.1.3.18); K01091 phosphoglycolate phosphatase [EC:3.1.3.18] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
HAD superfamily hydrolase (EC:3.1.3.18)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LWR2_TEPAE
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_11
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10488..10916)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NJI6_9DELT
Pathogenesis-related transcriptional factor and ERF protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Pathogenesis-related transcriptional factor and ERF protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_12
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11511..12311
DNA (801bp) protein (267aa)
Protein mazG n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJU2_9BACT
protein mazG Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
protein mazG
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_13
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12499..12876
DNA (378bp) protein (126aa)
30S ribosomal protein S6 n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2S0_DESAT
ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
ribosomal protein S6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_14
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12936..13178
DNA (243bp) protein (81aa)
30S ribosomal protein S18 n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2S1_DESAT
ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
ribosomal protein S18
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_15
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13317..14183
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2S2_DESAT
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_16
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14280..14732
DNA (453bp) protein (151aa)
50S ribosomal protein L9 n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2S3_DESAT
ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
ribosomal protein L9
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_17
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14884..16251
DNA (1368bp) protein (456aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Replicative DNA helicase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2S4_DESAT
replicative DNA helicase rbh
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_18
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16454..18928
DNA (2475bp) protein (825aa)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Leucine--tRNA ligase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NNP1_9DELT
leucyl-tRNA synthetase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_19
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18945..19472
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z020_DESAT
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_20
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19784..21781
DNA (1998bp) protein (666aa)
transketolase; K00615 transketolase [EC:2.2.1.1] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
transketolase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035D026E
transketolase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_21
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21880..22821
DNA (942bp) protein (314aa)
tRNA-dihydrouridine synthase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z018_DESAT
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_22
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23047..23460)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000365B4EB
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_23
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23551..24786)
DNA (1236bp) protein (412aa)
type ii secretion system f domain; K12278 MSHA biogenesis protein MshG Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Bacterial type II secretion system F domain protein id=4044244 bin=GWF2_Nitrospirae_44_13 species=Desulfovibrio sp. A2 genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
type II secretion system f domain
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_24
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24809..26452)
DNA (1644bp) protein (548aa)
General secretory pathway protein E n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQ24_9FIRM
GspE; pili biogenesis protein PilB-like ATPase; K02652 type IV pilus assembly protein PilB Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
GspE; pili biogenesis protein PilB-like ATPase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_25
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26449..27201)
DNA (753bp) protein (251aa)
AAA ATPase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ACA5_THEID
AAA ATPase; K02450 general secretion pathway protein A Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AAA ATPase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_26
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27360..28766)
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Fangia hongkongensis RepID=UPI00037DA29D
hofQ; outer membrane porin HofQ; K02507 protein transport protein HofQ Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hofQ; outer membrane porin HofQ
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_27
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28763..29317)
DNA (555bp) protein (185aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_28
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29314..29985)
DNA (672bp) protein (224aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_29
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30000..30578)
DNA (579bp) protein (193aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_357_30
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30759..31949)
DNA (1191bp) protein (397aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Displaying items 1-30 of 46 in total

View Taxonomy