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08E140C01_scaffold_738_curated

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_738_curated_1
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..447
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000374E500
Uncharacterized protein {ECO:0000313|EMBL:CCQ95528.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
08E140C01_scaffold_738_curated_2
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

462..830
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A8L6_DESDJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM00301.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
08E140C01_scaffold_738_curated_3
unknown

Not on your lists

847..2028
DNA (1182bp) protein (394aa)
Major facilitator superfamily MFS_1 transporter id=4182982 bin=GWF2_Clostridiales_38_85 species=Acetobacterium woodii genus=Acetobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
major facilitator superfamily transporter rbh
08E140C01_scaffold_738_curated_4
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(2473..4905)
DNA (2433bp) protein (811aa)
ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B4I5_HERA2
LuxR family transcriptional regulator; K03556 LuxR family transcriptional regulator, maltose regulon positive regulatory protein
ATP-dependent transcriptional regulator, MalT-like, LuxR family {ECO:0000313|EMBL:ABX04150.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
08E140C01_scaffold_738_curated_5
unknown

Not on your lists

5050..5367
DNA (318bp) protein (106aa)

This feature has no annotations

08E140C01_scaffold_738_curated_6
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5443..6783
DNA (1341bp) protein (447aa)
Fe-S oxidoreductase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ATH1_9CLOT
Fe-S oxidoreductase {ECO:0000313|EMBL:EOC99926.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Radical SAM domain-containing protein rbh
08E140C01_scaffold_738_curated_7
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7031..8119)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VNK3_CLOSH rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGC67108.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
08E140C01_scaffold_738_curated_8
unknown

Not on your lists

8558..8764
DNA (207bp) protein (69aa)

This feature has no annotations

08E140C01_scaffold_738_curated_9
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8944..9561
DNA (618bp) protein (206aa)
Putative Transcriptional regulator, TetR family n=1 Tax=Clostridium ultunense Esp RepID=M1ZFU2_9CLOT
Putative Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCQ92577.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
TetR family transcriptional regulator
08E140C01_scaffold_738_curated_10
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9608..10963
DNA (1356bp) protein (452aa)
Fe-S oxidoreductase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ATH1_9CLOT rbh
Fe-S oxidoreductase {ECO:0000313|EMBL:EOC99926.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
radical SAM protein rbh
08E140C01_scaffold_738_curated_11
unknown

Not on your lists

11114..12313
DNA (1200bp) protein (400aa)
Metal dependent phosphohydrolase id=2753676 bin=GWB1_Spirochaetales_60_80 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
metal dependent phosphohydrolase
08E140C01_scaffold_738_curated_12
unknown

Not on your lists

12526..14277
DNA (1752bp) protein (584aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GJD7_SPICD rbh
Long-chain-fatty-acid--CoA ligase rbh
08E140C01_scaffold_738_curated_13
unknown

Not on your lists

comp(14681..15937)
DNA (1257bp) protein (419aa)
Two-component sensor kinase id=4719064 bin=GWC2_CP_Nitrospirae-rel_42_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
PAS/PAC sensor-containing diguanylate cyclase
08E140C01_scaffold_738_curated_14
unknown

Not on your lists

16194..17216
DNA (1023bp) protein (341aa)
Site-specific recombinase, DNA invertase Pin id=4883701 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
site-specific recombinase, DNA invertase Pin
08E140C01_scaffold_738_curated_15
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

17851..18516
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QWJ6_SPHPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV30572.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
08E140C01_scaffold_738_curated_16
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18519..19532
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00030FE63A
YkqB {ECO:0000313|EMBL:EOR20576.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
08E140C01_scaffold_738_curated_17
unknown

Not on your lists

19543..21663
DNA (2121bp) protein (707aa)
Collagen triple helix repeat-containing protein n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GHD0_SPICD
Collagen triple helix repeat-containing protein
08E140C01_scaffold_738_curated_18
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

21665..22186
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RWR9_SPHGB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY13700.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
08E140C01_scaffold_738_curated_19
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

22206..22529
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RWR8_SPHGB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY13699.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
08E140C01_scaffold_738_curated_20
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22751..23695)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000382C1AD
Transcriptional regulatory protein {ECO:0000313|EMBL:CDI49008.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
transcriptional regulatory protein
08E140C01_scaffold_738_curated_21
unknown

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comp(23755..25344)
DNA (1590bp) protein (530aa)

This feature has no annotations

08E140C01_scaffold_738_curated_22
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(25368..26210)
DNA (843bp) protein (281aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RAH4_SPISS
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADK79465.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
08E140C01_scaffold_738_curated_23
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26224..27672)
DNA (1449bp) protein (483aa)
FAD binding protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IED8_9BURK
hypothetical protein
FAD binding protein {ECO:0000313|EMBL:EIF29090.1}; Flags: Precursor;; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
08E140C01_scaffold_738_curated_24
Petrotoga mobilis, Petrotoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(27665..28555)
DNA (891bp) protein (297aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BJA3_PETMO
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABX31048.1}; TaxID=403833 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Petrotoga.;" source="Petrotoga mobilis (strain DSM 10674 / SJ95).;"
08E140C01_scaffold_738_curated_25
Thermoanaerobacter mathranii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28623..29903)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00035F8520
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADH60265.1}; Flags: Precursor;; TaxID=583358 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3).;"
08E140C01_scaffold_738_curated_26
Selenomonas sp. CM52, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30258..30680
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Selenomonas sp. CM52 RepID=J4WJ36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJU25041.1}; TaxID=936381 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. CM52.;"
deoxyribose-phosphate aldolase
08E140C01_scaffold_738_curated_27
unknown

Not on your lists

30670..30840
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IVM6_9FIRM
08E140C01_scaffold_738_curated_28
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30950..31369
DNA (420bp) protein (140aa)
Sigma-70 region 4 type 2 n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SLI5_CLOC7
sigma-70 region 4 type 2
Sigma-70 region 4 type 2 {ECO:0000313|EMBL:ADL53622.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
08E140C01_scaffold_738_curated_29
unknown

Not on your lists

31362..31592
DNA (231bp) protein (77aa)

This feature has no annotations

08E140C01_scaffold_738_curated_30
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31573..32994
DNA (1422bp) protein (474aa)
Resolvase protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CRC3_9CLOT rbh
Resolvase protein {ECO:0000313|EMBL:CDA79313.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Resolvase domain
Displaying items 1-30 of 37 in total

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