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08E140C01_scaffold_195_curated

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Displaying items 1-30 of 206 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_195_curated_1
unknown

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47..550
DNA (504bp) protein (168aa)
id=4706875 bin=GWC2_Spirochaete_52_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_195_curated_2
unknown

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820..1917
DNA (1098bp) protein (366aa)
ABC transporter id=4706877 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
ABC transporter rbh
08E140C01_scaffold_195_curated_3
unknown

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2002..3528
DNA (1527bp) protein (509aa)
ABC transporter related protein id=4706878 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
ABC transporter; K10548 putative multiple sugar transport system ATP-binding protein rbh
08E140C01_scaffold_195_curated_4
unknown

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3538..4731
DNA (1194bp) protein (398aa)
Inner-membrane translocator id=4706879 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
inner-membrane translocator rbh
08E140C01_scaffold_195_curated_5
unknown

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comp(4799..6115)
DNA (1317bp) protein (439aa)
Putative uncharacterized protein id=4706880 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein rbh
08E140C01_scaffold_195_curated_6
unknown

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6284..6628
DNA (345bp) protein (115aa)
Putative uncharacterized protein id=4706881 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_195_curated_7
unknown

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6640..7005
DNA (366bp) protein (122aa)
chorismate mutase; K06208 chorismate mutase [EC:5.4.99.5]
Chorismate mutase id=4706882 bin=GWC2_Spirochaete_52_13 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_195_curated_8
unknown

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7175..8092
DNA (918bp) protein (306aa)
Putative uncharacterized protein id=4706883 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_195_curated_trna_1
unknown

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8135..8208
DNA (74bp)
transferRNA
08E140C01_scaffold_195_curated_trna_2
unknown

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8371..8452
DNA (82bp)
transferRNA
08E140C01_scaffold_195_curated_9
unknown

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9221..10963
DNA (1743bp) protein (581aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] rbh
DNA primase id=4706885 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_195_curated_10
unknown

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10956..13088
DNA (2133bp) protein (711aa)
RNA polymerase sigma factor id=4706886 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor rbh
08E140C01_scaffold_195_curated_11
unknown

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13167..13973
DNA (807bp) protein (269aa)
Zn-ribbon protein, possibly nucleic acid-binding protein id=4706887 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Zn-ribbon protein, possibly nucleic acid-binding protein; K07164
08E140C01_scaffold_195_curated_12
unknown

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14388..16862
DNA (2475bp) protein (825aa)
Radical SAM domain protein id=4706888 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
radical SAM protein rbh
08E140C01_scaffold_195_curated_13
unknown

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comp(16838..18832)
DNA (1995bp) protein (665aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein id=4706889 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
oligopeptide/dipeptide ABC transporter ATP-binding protein rbh
08E140C01_scaffold_195_curated_14
unknown

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comp(18822..19652)
DNA (831bp) protein (277aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=4706890 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
dipeptide/oligopeptide/nickel ABC transporter permease; K02034 peptide/nickel transport system permease protein rbh
08E140C01_scaffold_195_curated_15
unknown

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comp(19649..20617)
DNA (969bp) protein (323aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=4706919 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
dipeptide/oligopeptide/nickel ABC transporter permease; K02033 peptide/nickel transport system permease protein rbh
08E140C01_scaffold_195_curated_16
unknown

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comp(20614..22125)
DNA (1512bp) protein (504aa)
ABC-type dipeptide transport system, periplasmic component id=4706920 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
dipeptide ABC transporter periplasmic protein rbh
08E140C01_scaffold_195_curated_17
unknown

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comp(22487..23119)
DNA (633bp) protein (211aa)
Putative regulatory ligand binding protein, C-terminal domain of K+ channels like protein id=4706921 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
putative regulatory ligand binding protein, C-terminal domain of K+ channels like protein
08E140C01_scaffold_195_curated_18
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

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23370..23708
DNA (339bp) protein (113aa)
Transcriptional regulator PadR family protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2E7X7_9BACT
Transcriptional regulator PadR family protein {ECO:0000313|EMBL:ERJ10991.1}; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
transcriptional regulator PadR family
08E140C01_scaffold_195_curated_19
unknown

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23747..25156
DNA (1410bp) protein (470aa)
Putative membrane protein id=4706922 bin=GWC2_Spirochaete_52_13 species=Acetobacterium woodii genus=Acetobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein rbh
08E140C01_scaffold_195_curated_20
unknown

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comp(25168..25995)
DNA (828bp) protein (276aa)
MazG family protein; K04765 ATP diphosphatase [EC:3.6.1.8] rbh
MazG family protein id=4706923 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_195_curated_21
unknown

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comp(26070..27023)
DNA (954bp) protein (318aa)

This feature has no annotations

08E140C01_scaffold_195_curated_22
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(27060..27743)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QW44_SPHPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV28287.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
08E140C01_scaffold_195_curated_23
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(27757..30183)
DNA (2427bp) protein (809aa)
30S ribosomal protein S1 n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QW43_SPHPG rbh
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 rbh
Ribosomal protein S1 {ECO:0000313|EMBL:AEV28286.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
08E140C01_scaffold_195_curated_24
unknown

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comp(30180..30905)
DNA (726bp) protein (242aa)
pseudouridine synthase family protein; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] rbh
Pseudouridine synthase id=3871580 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_195_curated_25
unknown

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comp(30895..31467)
DNA (573bp) protein (191aa)
Chromosome segregation and condensation protein, ScpB id=3871582 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B
08E140C01_scaffold_195_curated_26
unknown

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comp(31464..32402)
DNA (939bp) protein (313aa)
Putative uncharacterized protein id=3871584 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein; K05896 segregation and condensation protein A
08E140C01_scaffold_195_curated_27
unknown

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comp(32445..33524)
DNA (1080bp) protein (360aa)
Protein RecA id=3871586 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
protein RecA; K03553 recombination protein RecA rbh
08E140C01_scaffold_195_curated_28
unknown

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comp(33578..34033)
DNA (456bp) protein (152aa)
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]
D-tyrosyl-tRNA(Tyr) deacylase id=3871588 bin=GWC2_Spirochaete_52_13 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Displaying items 1-30 of 206 in total

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