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08E140C01_scaffold_1052_curated

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_1052_curated_1
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(3..566)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YN55_TREPZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF85429.1}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
08E140C01_scaffold_1052_curated_2
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(563..1147)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXK5_SPHGB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY12055.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
08E140C01_scaffold_1052_curated_3
unknown

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1469..2854
DNA (1386bp) protein (462aa)
ABC-type sugar transport system, periplasmic component id=3267142 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
sugar ABC transporter periplasmic protein; K02027 multiple sugar transport system substrate-binding protein rbh
08E140C01_scaffold_1052_curated_4
unknown

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3067..3996
DNA (930bp) protein (310aa)
Permease component of ABC-type sugar transporter id=3267138 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
permease component of ABC-type sugar transporter; K02025 multiple sugar transport system permease protein rbh
08E140C01_scaffold_1052_curated_5
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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3990..4952
DNA (963bp) protein (321aa)
ABC-type sugar transport system, permease component n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QY68_SPHPG rbh
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein rbh
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:AEV29633.1}; Flags: Precursor;; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
08E140C01_scaffold_1052_curated_6
unknown

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4949..6400
DNA (1452bp) protein (484aa)
Glycosyltransferase id=4797814 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
glycosyltransferase rbh
08E140C01_scaffold_1052_curated_7
unknown

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6404..7450
DNA (1047bp) protein (349aa)
Transcriptional regulator, LacI family id=4797816 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
transcriptional regulator, LacI family; K02529 LacI family transcriptional regulator rbh
08E140C01_scaffold_1052_curated_8
unknown

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7482..9317
DNA (1836bp) protein (612aa)
glycosidase; K00690 sucrose phosphorylase [EC:2.4.1.7] rbh
Glycosidase id=4797818 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_1052_curated_9
unknown

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9709..9993
DNA (285bp) protein (95aa)

This feature has no annotations

08E140C01_scaffold_1052_curated_10
unknown

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9969..10676
DNA (708bp) protein (236aa)
Metal dependent phosphohydrolase id=3419598 bin=GWC2_Spirochaete_52_13 species=Clostridium beijerinckii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
metal dependent phosphohydrolase
08E140C01_scaffold_1052_curated_11
unknown

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comp(10745..11953)
DNA (1209bp) protein (403aa)
ROK family protein id=4797882 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
ROK family protein rbh
08E140C01_scaffold_1052_curated_12
unknown

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comp(11950..12939)
DNA (990bp) protein (330aa)
Membrane protein, putative id=4797883 bin=GWC2_Spirochaete_52_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
permease
08E140C01_scaffold_1052_curated_13
unknown

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comp(12936..14327)
DNA (1392bp) protein (464aa)
UPF0597 protein DEFDS_0785 id=4797884 bin=GWC2_Spirochaete_52_13 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_1052_curated_14
unknown

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comp(14324..15241)
DNA (918bp) protein (306aa)
Amidohydrolase 2 id=4797885 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
amidohydrolase 2 rbh
08E140C01_scaffold_1052_curated_15
unknown

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comp(15265..16086)
DNA (822bp) protein (274aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family id=4797886 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
carbohydrate ABC transporter membrane protein 2; K02026 multiple sugar transport system permease protein rbh
08E140C01_scaffold_1052_curated_16
unknown

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comp(16076..16981)
DNA (906bp) protein (302aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family id=4797887 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
carbohydrate ABC transporter membrane protein 1; K02025 multiple sugar transport system permease protein rbh
08E140C01_scaffold_1052_curated_17
unknown

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comp(17056..18390)
DNA (1335bp) protein (445aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family id=4797888 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
carbohydrate ABC transporter substrate-binding protein, CUT1 family; K02027 multiple sugar transport system substrate-binding protein rbh
08E140C01_scaffold_1052_curated_18
unknown

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comp(18398..20224)
DNA (1827bp) protein (609aa)
Phosphoglucosamine mutase id=4797889 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Phosphoglucosamine mutase
08E140C01_scaffold_1052_curated_19
unknown

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comp(20227..21357)
DNA (1131bp) protein (377aa)
Glycoside hydrolase family 57 id=4797890 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
glycoside hydrolase family 57 rbh
08E140C01_scaffold_1052_curated_20
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21782..22666)
DNA (885bp) protein (295aa)
Sialic acid lyase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PAV7_9FIRM rbh
Sialic acid lyase {ECO:0000313|EMBL:EDS11287.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
N-acetylneuraminate lyase
08E140C01_scaffold_1052_curated_21
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22660..23487)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QTV5_SPHPG
dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AEV29131.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
08E140C01_scaffold_1052_curated_22
Vibrio halioticoli, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23525..25009)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Vibrio halioticoli NBRC 102217 RepID=V5F2S4_9VIBR
hypothetical protein; K07793 putative tricarboxylic transport membrane protein
Uncharacterized protein {ECO:0000313|EMBL:GAD89434.1}; TaxID=1219072 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio halioticoli NBRC 102217.;"
08E140C01_scaffold_1052_curated_23
Sporosarcina newyorkensis, Sporosarcina, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25022..25525)
DNA (504bp) protein (168aa)
YjbE family integral membrane protein n=1 Tax=Sporosarcina newyorkensis 2681 RepID=F9DRR2_9BACL
YjbE family integral membrane protein {ECO:0000313|EMBL:EGQ26565.1}; TaxID=1027292 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Sporosarcina.;" source="Sporosarcina newyorkensis 2681.;"
08E140C01_scaffold_1052_curated_24
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(25604..26572)
DNA (969bp) protein (323aa)
Uncharacterized protein UPF0065 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HM22_9FIRM rbh
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:EAX48873.1}; Flags: Precursor;; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
hypothetical protein
08E140C01_scaffold_1052_curated_25
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26587..27567)
DNA (981bp) protein (327aa)
Dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BVN2_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CCX59568.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
08E140C01_scaffold_1052_curated_26
unknown

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comp(27579..28496)
DNA (918bp) protein (306aa)
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] rbh
Dihydrodipicolinate synthase id=3453308 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_1052_curated_27
unknown

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comp(28563..29258)
DNA (696bp) protein (232aa)
FCD domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DB77_9CLOT
GntR domain-containing protein; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
08E140C01_scaffold_1052_curated_28
unknown

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29639..30397
DNA (759bp) protein (253aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase id=3179842 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Displaying 28 items

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