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bjp_ig2103_scaffold_8_curated

Search features with annotation key words

Displaying items 271-300 of 344 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_8_curated_270
unknown

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comp(348212..348919)
DNA (708bp) protein (236aa)
Tetratricopeptide repeat family protein id=4910583 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_8_curated_271
unknown

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348933..352157
DNA (3225bp) protein (1075aa)
Diguanylate cyclase (GGDEF) domain-containing protein id=4910584 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
diguanylate cyclase domain-containing protein
bjp_ig2103_scaffold_8_curated_272
unknown

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352158..352736
DNA (579bp) protein (193aa)
Prepilin-type cleavage/methylation domain containing protein id=4910585 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_8_curated_273
unknown

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352733..353359
DNA (627bp) protein (209aa)
id=4910586 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_8_curated_274
unknown

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353359..355425
DNA (2067bp) protein (689aa)
id=4910587 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_8_curated_275
unknown

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355422..356516
DNA (1095bp) protein (365aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase id=4910588 bin=GWC2_ACD39_50_8 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_8_curated_276
unknown

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356513..358384
DNA (1872bp) protein (624aa)
seg 19..30 id=45377 bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
bjp_ig2103_scaffold_8_curated_277
unknown

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358475..360103
DNA (1629bp) protein (543aa)
ABC-type uncharacterized transporter id=3779953 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
ABC transporter
bjp_ig2103_scaffold_8_curated_278
unknown

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360181..361059
DNA (879bp) protein (293aa)
Binding-protein-dependent transport system inner membrane protein id=3779952 bin=GWC2_ACD39_50_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_ACD39_50_8 organism_group=ACD39
CUT1 family carbohydrate ABC transporter membrane protein 1; K02025 multiple sugar transport system permease protein
bjp_ig2103_scaffold_8_curated_279
unknown

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361077..362042
DNA (966bp) protein (322aa)
UPI0002971953 related cluster id=3779951 bin=GWC2_ACD39_50_8 species=Thermus oshimai genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_ACD39_50_8 organism_group=ACD39
ABC-type sugar transport system, permease component
bjp_ig2103_scaffold_8_curated_280
unknown

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362045..363400
DNA (1356bp) protein (452aa)
Putative Sugar ABC transporter, periplasmic sugar-binding protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHE9_CLOAI id=48921 bin=ACD39 species=Candidatus Cloacimonas acidaminovorans genus=Candidatus Cloacimonas taxon_order=unknown taxon_class=unknown phylum=Cloacimonetes tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
putative ABC transporter substrate-binding protein
bjp_ig2103_scaffold_8_curated_281
unknown

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363387..364400
DNA (1014bp) protein (338aa)
Phosphoesterase RecJ domain protein id=3779835 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein
bjp_ig2103_scaffold_8_curated_282
unknown

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364397..365518
DNA (1122bp) protein (374aa)
seg 29..43 id=46676 bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
bjp_ig2103_scaffold_8_curated_283
unknown

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365521..366813
DNA (1293bp) protein (431aa)
id=3779831 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_8_curated_284
unknown

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comp(366826..367974)
DNA (1149bp) protein (383aa)
anmK; anhydro-N-acetylmuramic acid kinase (EC:2.7.1.170)
Anhydro-N-acetylmuramic acid kinase id=3779828 bin=GWC2_ACD39_50_8 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_8_curated_285
unknown

Not on your lists


368193..369266
DNA (1074bp) protein (358aa)
Protein RecA id=3779826 bin=GWC2_ACD39_50_8 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
recA protein; K03553 recombination protein RecA rbh
bjp_ig2103_scaffold_8_curated_286
unknown

Not on your lists

369346..372204
DNA (2859bp) protein (953aa)
protein serine/threonine phosphatase id=48477 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
Protein serine/threonine phosphatase
bjp_ig2103_scaffold_8_curated_287
unknown

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comp(372188..375052)
DNA (2865bp) protein (955aa)
Protein serine/threonine phosphatase with Cache sensor id=3924587 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
HAMP domain-containing protein,cache domain-containing protein
bjp_ig2103_scaffold_8_curated_288
unknown

Not on your lists

375195..376217
DNA (1023bp) protein (341aa)
Integral membrane protein id=3924585 bin=GWC2_ACD39_50_8 species=unknown genus=Alishewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
hypothetical protein; K08974 putative membrane protein
bjp_ig2103_scaffold_8_curated_289
unknown

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comp(376599..378278)
DNA (1680bp) protein (560aa)
tai:Taci_0009 extracellular solute-binding protein family 5; K02035 peptide/nickel transport system substrate-binding protein id=44656 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
bjp_ig2103_scaffold_8_curated_290
unknown

Not on your lists

378489..378971
DNA (483bp) protein (161aa)
Ribosome maturation factor RimP id=3924577 bin=GWC2_ACD39_50_8 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
hypothetical protein; K09748 ribosome maturation factor RimP
bjp_ig2103_scaffold_8_curated_291
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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378985..380058
DNA (1074bp) protein (358aa)
Transcription elongation protein nusA n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E140_9FIRM rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
nusA; transcription termination factor nusa; K02600 N utilization substance protein A rbh
bjp_ig2103_scaffold_8_curated_292
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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380076..382478
DNA (2403bp) protein (801aa)
Translation initiation factor IF-2 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CNN8_DESK7 rbh
translation initiation factor IF-2; K02519 translation initiation factor IF-2 rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
bjp_ig2103_scaffold_8_curated_293
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

382484..382765
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NFJ4_DESAR
hypothetical protein; K09764 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB10113.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
bjp_ig2103_scaffold_8_curated_294
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

382762..383115
DNA (354bp) protein (118aa)
Ribosome-binding factor A n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=RBFA_PELCD
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A
Ribosome-binding factor A {ECO:0000255|HAMAP-Rule:MF_00003}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
bjp_ig2103_scaffold_8_curated_295
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

383142..384164
DNA (1023bp) protein (341aa)
phosphoesterase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2BE0B
exopolyphosphatase related protein; K06881 phosphoesterase RecJ domain-containing protein
Phosphoesterase, putative {ECO:0000313|EMBL:ABA88803.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
bjp_ig2103_scaffold_8_curated_296
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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384167..385117
DNA (951bp) protein (317aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
truB; tRNA pseudouridine synthase B (EC:5.4.99.-); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
tRNA pseudouridine synthase B n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XS09_9CLOT
bjp_ig2103_scaffold_8_curated_297
unknown

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385107..386048
DNA (942bp) protein (314aa)
FMN adenylyltransferase/riboflavin kinase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF id=1723429 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
bjp_ig2103_scaffold_8_curated_298
unknown

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comp(386062..386919)
DNA (858bp) protein (286aa)
id=2884796 bin=GWC2_ACD39_50_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_8_curated_299
unknown

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comp(386916..389702)
DNA (2787bp) protein (929aa)
fused DNA polymerase I 5'->3' exonuclease/3'->5' polymerase/3'->5' exonuclease; K02335 DNA polymerase I [EC:2.7.7.7] rbh
Fused DNA polymerase I 5'->3' exonuclease/3'->5' polymerase/3'->5' exonuclease id=2884797 bin=GWC2_ACD39_50_8 species=Haemophilus parainfluenzae genus=Haemophilus taxon_order=Pasteurellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
Displaying items 271-300 of 344 in total

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