ggKbase home page

bjp_ig2103_scaffold_8_curated_296

Organism: BJP_Ig2103_Hor_218_2014_ACD39_50_23_curated

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 13 / 38
Location: 384167..385117

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.6
  • Coverage: 314.0
  • Bit_score: 191
  • Evalue 2.50e-45
truB; tRNA pseudouridine synthase B (EC:5.4.99.-); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 293.0
  • Bit_score: 183
  • Evalue 1.10e-43
tRNA pseudouridine synthase B n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XS09_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 314.0
  • Bit_score: 191
  • Evalue 1.20e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hungatella hathewayi → Hungatella → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 951
ATGGCAGACGGCTGTCTGGTAGTTTACAAACCACGGGGCTGCTCTTCGCACGATATCATCGACAAGGTTCGTCGCGTCTATAAGGTCAAATGCGGGCATGCCGGCACTCTTGATCCCATGGCGCAGGGCGTTCTTCTTGTTTTTTGCGGGCGCGCGCTCAAGCTGCTGACCTTTATTCCGCCCGAACATCTCGACAAAACCTACCTGATGAAAGTGTCTCTGGGCAGCACCACCGACAGTTACGACGCCACCGGCAATGTAACATCGACTTTTGAGCATGAAGTAAACTTTTCGAATGAGTTGCTGATGAACTCGCTGCGCGGCTTTGTCGGCAACTATGATCAGGTTCCCCCGGCCTTTTCGGCAATCAAGGTCGGTGGCAAACGTGCTTATGCCATGGCCCGCGCCGGCGAAGAAGTCGTGCTGAAAAGCCGCAAGGTGCATGTAACCTCGATTCGGCTGGTCTCTGATTACGTCAGCGCCTCGGTTCGACAGCTTATTTTGCGCGTTCATTGCTCGCGCGGCACTTATGTGCGCTCGATCGCGCATGACCTCGGCCAGAAACTCGGCTGCGGCGGGCACCTCTCTTATCTGCTGCGCGAAAGAGTCGGCCAATGGGCATTCTCTCAGGCATTCCCGTATTGGAAAATCGAAAAGGGTGTGCCGTTTACTGATACTGCTTCTTTTATCAGCTGCGAAAACATACTGCCCTACCCGCGACTCACTGTCAGTGCCGAAGGGCAGCAGAAAATCAGCAAGGGGCAACAGATAAGCCGAAAAGATATCGTTAAACTCGAAACCGACAGCCCCGAACTCTGCGACATGGTGCAGATCATTTCGCCAGCCGGTCGGCTGATCGCGGTTTACGGCACGTCAAAAAGTCAGTCAGACGATCAGAAAGCCGGCTTTCGACTCAGCCCGGTCAGGGTTTTTCCAGAAAATGAAGCTTAA
PROTEIN sequence
Length: 317
MADGCLVVYKPRGCSSHDIIDKVRRVYKVKCGHAGTLDPMAQGVLLVFCGRALKLLTFIPPEHLDKTYLMKVSLGSTTDSYDATGNVTSTFEHEVNFSNELLMNSLRGFVGNYDQVPPAFSAIKVGGKRAYAMARAGEEVVLKSRKVHVTSIRLVSDYVSASVRQLILRVHCSRGTYVRSIAHDLGQKLGCGGHLSYLLRERVGQWAFSQAFPYWKIEKGVPFTDTASFISCENILPYPRLTVSAEGQQKISKGQQISRKDIVKLETDSPELCDMVQIISPAGRLIAVYGTSKSQSDDQKAGFRLSPVRVFPENEA*