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bjp_ig2103_scaffold_396_curated_18

Organism: BJP_Ig2103_Hor_218_2014_ACD39_50_23_curated

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 13 / 38
Location: comp(15140..15679)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Joostella marina DSM 19592 RepID=I3C756_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 37.7
  • Coverage: 183.0
  • Bit_score: 112
  • Evalue 4.10e-22
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EIJ39449.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.7
  • Coverage: 183.0
  • Bit_score: 112
  • Evalue 8.40e-22
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 186.0
  • Bit_score: 97
  • Evalue 5.60e-18

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Taxonomy

Joostella marina → Joostella → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 540
ATGATGAATGATACCGAAGCTATAAAATCTGCTTTAAATGGTCGCGAAGAAGGCTTTCGCGCCATTTTTGCGAACCACGGCGACTTTCTTTTCACGCACGCTCTGCGCTATCTGAAAAATCGCGAACTGTCTGAAGACGCTGTACAGGAAACCTTTACCGCTGCCTTCAGAAGCCTCGCGAGTTTTCGCGGCGACGCGCGGCTGCGCACCTGGCTTTACCGAATTCTGCGCAACAACTGTATGAGACTGCTCAGTAAAAATCCGGCACCACGGCAGTCCCTGTTTGAACCCGCCGGTGAAGGGCAGACAGACAGTATCGAGTGCCGCCTTGATGTCGCGGCAATACTCGACAGCATGCCGGAACGCGATCGTTCGATTCTGCTGCTGACCTATTGGGACGAGCTGCCACTCAAAGAAGTCGCTGAAATTCTCGAAATCAGCGAGAACAATGGCAAAATTGTTCTCTTTCGCGCCCGCAAACGCTTCGCCGACCTCTGGCAAAGGCACGGCAGAAAGGAAGACACCACAAATGCAATGTAA
PROTEIN sequence
Length: 180
MMNDTEAIKSALNGREEGFRAIFANHGDFLFTHALRYLKNRELSEDAVQETFTAAFRSLASFRGDARLRTWLYRILRNNCMRLLSKNPAPRQSLFEPAGEGQTDSIECRLDVAAILDSMPERDRSILLLTYWDELPLKEVAEILEISENNGKIVLFRARKRFADLWQRHGRKEDTTNAM*