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bjp_ig2103_scaffold_396_curated

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_396_curated_1
unknown

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comp(383..1009)
DNA (627bp) protein (209aa)
ribosomal RNA methyltransferase RrmJ/FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
Ribosomal RNA large subunit methyltransferase E id=4856892 bin=GWC2_ACD39_50_8 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_396_curated_2

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comp(1011..2660)
DNA (1650bp) protein (550aa)
nucleotidase; K01081 5'-nucleotidase [EC:3.1.3.5]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FFD3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE16609.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig2103_scaffold_396_curated_3

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comp(2687..2947)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2G0B4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE16605.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig2103_scaffold_396_curated_4

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comp(2944..4356)
DNA (1413bp) protein (471aa)
cofG; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG; K11780 FO synthase subunit 1 [EC:2.5.1.77]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EDM9_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE16606.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig2103_scaffold_396_curated_5

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4477..5496
DNA (1020bp) protein (340aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2F1Y0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE16603.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig2103_scaffold_396_curated_6
unknown

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5510..6505
DNA (996bp) protein (332aa)
hypothetical protein; K03924 MoxR-like ATPase [EC:3.6.3.-] rbh
ATPase id=3878942 bin=GWF2_Lentisphaerae_57_35 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
bjp_ig2103_scaffold_396_curated_7
unknown

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6525..7415
DNA (891bp) protein (297aa)
Uncharacterized protein id=4233128 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
hypothetical protein
bjp_ig2103_scaffold_396_curated_8
unknown

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7428..8303
DNA (876bp) protein (292aa)

This feature has no annotations

bjp_ig2103_scaffold_396_curated_9
unknown

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8557..9195
DNA (639bp) protein (213aa)

This feature has no annotations

bjp_ig2103_scaffold_396_curated_10

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9192..10199
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BI05_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD68423.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
vWA domain protein; K07114 uncharacterized protein
bjp_ig2103_scaffold_396_curated_11
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10199..11233
DNA (1035bp) protein (345aa)
Mg-chelatase subunit ChlD n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IMA0_9BACT
Mg-chelatase subunit ChlD
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:CBK64062.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
bjp_ig2103_scaffold_396_curated_12
unknown

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11196..11333
DNA (138bp) protein (46aa)

This feature has no annotations

bjp_ig2103_scaffold_396_curated_13
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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11317..12531
DNA (1215bp) protein (405aa)
BatB n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C9I8_9PLAN
BatB {ECO:0000313|EMBL:EDL58656.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
tetratricopeptide tpr_1 repeat-containing protein; K07114 uncharacterized protein
bjp_ig2103_scaffold_396_curated_14
unknown

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comp(12535..13524)
DNA (990bp) protein (330aa)
response regulator id=47388 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
diguanylate cyclase
bjp_ig2103_scaffold_396_curated_15
unknown

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comp(13550..13762)
DNA (213bp) protein (71aa)
hypothetical protein id=47384 bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
bjp_ig2103_scaffold_396_curated_16
unknown

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comp(13898..14629)
DNA (732bp) protein (244aa)
transmembrane_regions 5..24 id=47387 bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
bjp_ig2103_scaffold_396_curated_17
unknown

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comp(14626..15150)
DNA (525bp) protein (175aa)
transmembrane_regions 32..54 id=47383 bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
bjp_ig2103_scaffold_396_curated_18
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(15140..15679)
DNA (540bp) protein (180aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Joostella marina DSM 19592 RepID=I3C756_9FLAO
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EIJ39449.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
bjp_ig2103_scaffold_396_curated_19
unknown

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comp(16046..16954)
DNA (909bp) protein (303aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158) id=24479396 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158]
bjp_ig2103_scaffold_396_curated_20

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comp(17142..17696)
DNA (555bp) protein (185aa)
Peptidyl-prolyl isomerase (Modular protein) {ECO:0000313|EMBL:CBH76099.1}; EC=5.2.1.8 {ECO:0000313|EMBL:CBH76099.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
peptidyl-prolyl isomerase (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
hypothetical protein n=2 Tax=Zetaproteobacteria RepID=UPI000378FBB9
bjp_ig2103_scaffold_396_curated_21
unknown

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17815..19311
DNA (1497bp) protein (499aa)

This feature has no annotations

bjp_ig2103_scaffold_396_curated_22
unknown

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comp(19314..20072)
DNA (759bp) protein (253aa)

This feature has no annotations

bjp_ig2103_scaffold_396_curated_23
unknown

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20286..21428
DNA (1143bp) protein (381aa)
glycosyl transferase, group 1 id=7201289 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
group 1 glycosyl transferase
bjp_ig2103_scaffold_396_curated_24
unknown

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21596..24103
DNA (2508bp) protein (836aa)
Nucleotidyl transferase id=4834345 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
nucleotidyltransferase rbh
bjp_ig2103_scaffold_396_curated_25
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(24177..25673)
DNA (1497bp) protein (499aa)
Amidohydrolase 3 n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QS49_ACEAZ
amidohydrolase; K07047
Amidohydrolase 3 {ECO:0000313|EMBL:ADL13340.1}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288).;"
bjp_ig2103_scaffold_396_curated_26
unknown

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comp(25676..26011)
DNA (336bp) protein (112aa)

This feature has no annotations

bjp_ig2103_scaffold_396_curated_27
unknown

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26158..27432
DNA (1275bp) protein (425aa)
General secretion pathway protein GspE n=1 Tax=Pseudomonas syringae pv. tabaci str. ATCC 11528 RepID=F3K1A5_PSESZ
general secretory pathway protein E; K02454 general secretion pathway protein E
bjp_ig2103_scaffold_396_curated_28
unknown

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27429..28445
DNA (1017bp) protein (339aa)
transmembrane_regions 121..143 id=45002 bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
bjp_ig2103_scaffold_396_curated_29
unknown

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28442..29455
DNA (1014bp) protein (338aa)
transmembrane_regions 308..330 id=45003 bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
bjp_ig2103_scaffold_396_curated_30
unknown

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29452..29823
DNA (372bp) protein (124aa)
seg 7..18 id=45005 bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
Displaying items 1-30 of 48 in total

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