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BJP_Ig2103_Hor_218_2014_ACD39_50_23_curated

BJP_IG2103_unknown_50_1
In projects: BJP_IG2103  |  ggdb  |  horonobe_genomes  |  priority_phyla_sg_temp

Consensus taxonomy:

Metagenomic Context

Manually curated genome Candidate phylum (ggDB)

Properties

Avg. coverage: 1.00 Longest contig: 608.23 Kbp Bin length: 5.68 Mbp GC content: 49.88 %
Contigs count: 45 Features count: 4608 rRNAs count: 1 tRNAs count: 46

Genome completeness

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 13 / 38

Description

Riflebacteria

Displaying 45 items
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2103_scaffold_1265_curated
Species: uncultured bacterium (50%)
4 19880 bp 47.39 1.00 97.88
bjp_ig2103_scaffold_6077_curated 5 5136 bp 48.07 1.00 96.96
bjp_ig2103_scaffold_2536_curated 7 13677 bp 48.86 1.00 94.60
bjp_ig2103_scaffold_553_curated 27 38983 bp 50.07 1.00 94.11
bjp_ig2103_scaffold_5_curated 307 428714 bp 51.02 1.00 93.35
bjp_ig2103_scaffold_248_curated 59 68212 bp 49.28 1.00 93.31
bjp_ig2103_scaffold_396_curated 48 50715 bp 50.99 1.00 92.95
bjp_ig2103_scaffold_242_curated 68 68857 bp 49.47 1.00 92.92
bjp_ig2103_scaffold_8_curated 344 433186 bp 50.91 1.00 92.88
bjp_ig2103_scaffold_203_curated 61 79539 bp 49.85 1.00 92.10
bjp_ig2103_scaffold_251_curated 65 83393 bp 50.45 1.00 91.95
bjp_ig2103_scaffold_3_curated 502 608234 bp 50.44 1.00 91.88
bjp_ig2103_scaffold_63_curated 235 271524 bp 48.73 1.00 91.77
bjp_ig2103_scaffold_161_curated 77 89075 bp 48.00 1.00 91.63
bjp_ig2103_scaffold_13_curated 335 396302 bp 49.97 1.00 91.55
bjp_ig2103_scaffold_149_curated 139 180986 bp 50.61 1.00 91.48
bjp_ig2103_scaffold_50_curated 123 156267 bp 49.24 1.00 91.35
bjp_ig2103_scaffold_74_curated 167 207169 bp 49.44 1.00 91.29
bjp_ig2103_scaffold_305_curated 81 101588 bp 48.75 1.00 91.28
bjp_ig2103_scaffold_264_curated 57 64853 bp 49.90 1.00 91.16
bjp_ig2103_scaffold_1652_curated 16 15909 bp 49.83 1.00 91.14
bjp_ig2103_scaffold_66_curated 220 278258 bp 50.01 1.00 91.05
bjp_ig2103_scaffold_2010_curated 13 13607 bp 50.31 1.00 90.88
bjp_ig2103_scaffold_494_curated 55 66653 bp 49.56 1.00 90.81
bjp_ig2103_scaffold_34_curated 152 181395 bp 50.21 1.00 90.78
bjp_ig2103_scaffold_191_curated 101 133113 bp 49.31 1.00 90.39
bjp_ig2103_scaffold_25_curated 466 546593 bp 49.78 1.00 90.29
bjp_ig2103_scaffold_2097_curated
Domain: Bacteria (63.64%)
11 13055 bp 48.85 1.00 90.26
bjp_ig2103_scaffold_33_curated 156 184658 bp 49.98 1.00 89.72
bjp_ig2103_scaffold_118_curated 133 158108 bp 49.09 1.00 89.60
bjp_ig2103_scaffold_99_curated 174 204301 bp 50.59 1.00 89.57
bjp_ig2103_scaffold_301_curated 70 102167 bp 49.81 1.00 89.48
bjp_ig2103_scaffold_217_curated 51 73329 bp 49.89 1.00 89.37
bjp_ig2103_scaffold_357_curated 29 54655 bp 50.91 1.00 89.31
bjp_ig2103_scaffold_418_curated 41 54550 bp 52.07 1.00 89.15
bjp_ig2103_scaffold_947_curated 18 25030 bp 48.62 1.00 87.82
bjp_ig2103_scaffold_287_curated
Domain: Bacteria (71.88%)
64 61566 bp 47.50 1.00 87.19
bjp_ig2103_scaffold_1332_curated 6 20920 bp 48.19 1.00 87.09
bjp_ig2103_scaffold_378_curated 53 52341 bp 47.34 1.00 86.51
bjp_ig2103_scaffold_1128_curated 13 22089 bp 39.57 1.00 85.86
bjp_ig2103_scaffold_2742_curated
Domain: Bacteria (50%)
6 10210 bp 42.91 1.00 83.12
bjp_ig2103_scaffold_4130_curated 12 7180 bp 45.74 1.00 81.31
bjp_ig2103_scaffold_1854_curated 11 14541 bp 48.13 1.00 80.07
bjp_ig2103_scaffold_2989_curated
Phylum: Proteobacteria (50%)
10 9451 bp 47.57 1.00 73.61
bjp_ig2103_scaffold_4773_curated 16 9648 bp 43.99 1.00 66.60
Displaying 45 items

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.