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bjp_ig2103_scaffold_73_curated

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Displaying items 1-30 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_73_curated_1

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291..1238
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EI26_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE18316.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
beta-lactamase rbh
bjp_ig2103_scaffold_73_curated_2
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1242..2006)
DNA (765bp) protein (255aa)
UBA/THIF-type NAD/FAD binding fold protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IB9_DECAR rbh
UBA/THIF-type NAD/FAD binding fold rbh
UBA/THIF-type NAD/FAD binding fold protein {ECO:0000313|EMBL:AAZ45412.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_3
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2006..3109)
DNA (1104bp) protein (368aa)
Metal-dependent phosphohydrolase, HD subdomain:Hpt n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IB8_DECAR rbh
metal-dependent phosphohydrolase rbh
Metal-dependent phosphohydrolase, HD subdomain:Hpt {ECO:0000313|EMBL:AAZ45413.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3124..4218
DNA (1095bp) protein (365aa)
polyprenyl synthetase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] rbh
Polyprenyl synthetase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IB7_DECAR rbh
Polyprenyl synthetase {ECO:0000313|EMBL:AAZ45414.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_trna_1
unknown

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4235..4308
DNA (74bp)
transferRNA
bjp_ig2103_scaffold_73_curated_5
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4556..4786
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IB5_DECAR
hypothetical protein; K06950 uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ45416.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_6
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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4783..6390
DNA (1608bp) protein (536aa)
signal transduction histidine kinase (EC:2.7.3.-); K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Signal transduction histidine kinase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IB4_DECAR rbh
bjp_ig2103_scaffold_73_curated_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6348..7700
DNA (1353bp) protein (451aa)
Helix-turn-helix, Fis-type n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IB3_DECAR rbh
Fis family transcriptional regulator; K02667 two-component system, NtrC family, response regulator PilR rbh
Helix-turn-helix, Fis-type {ECO:0000313|EMBL:AAZ45418.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_8
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7700..8263
DNA (564bp) protein (188aa)
N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IB2_DECAR
N-acetyl-anhydromuranmyl-L-alanine amidase; K03806 AmpD protein
N-acetylmuramoyl-L-alanine amidase, family 2 {ECO:0000313|EMBL:AAZ45419.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_9
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8240..9400)
DNA (1161bp) protein (387aa)
hypothetical protein (EC:2.6.1.-) rbh
Aminotransferase {ECO:0000313|EMBL:AAZ45420.1}; EC=2.6.1.- {ECO:0000313|EMBL:AAZ45420.1};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Aminotransferase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IB1_DECAR rbh
bjp_ig2103_scaffold_73_curated_10
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9463..11307)
DNA (1845bp) protein (615aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.32); K01596 phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] rbh
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IB0_DECAR rbh
bjp_ig2103_scaffold_73_curated_11
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11553..13832
DNA (2280bp) protein (760aa)
malic enzyme (EC:1.1.1.39); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] rbh
Phosphate acetyl/butaryl transferase:Malic enzyme, N-terminal:Malic enzyme, NAD-binding protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IA9_DECAR rbh
Phosphate acetyl/butaryl transferase:Malic enzyme, N-terminal:Malic enzyme, NAD-binding protein {ECO:0000313|EMBL:AAZ45422.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_12
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13936..14985
DNA (1050bp) protein (350aa)
murein-DD-endopeptidase; K07262 D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] rbh
Murein-DD-endopeptidase, Serine peptidase, MEROPS family S11 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IA8_DECAR rbh
Murein-DD-endopeptidase, Serine peptidase, MEROPS family S11 {ECO:0000313|EMBL:AAZ45423.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_13
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15030..15815)
DNA (786bp) protein (262aa)
Transcriptional regulator, IclR family n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IA7_DECAR rbh
regulatory proteins, IclR rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AAZ45424.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_14
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15886..16617
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IA6_DECAR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ45425.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_15
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16614..18047
DNA (1434bp) protein (478aa)
4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IA5_DECAR rbh
4Fe-4S ferredoxin rbh
4Fe-4S ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:AAZ45426.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_16
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18050..18748
DNA (699bp) protein (233aa)
Aldehyde dehydrogenase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IA4_DECAR rbh
aldehyde dehydrogenase rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:AAZ45427.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_17
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18748..19704
DNA (957bp) protein (319aa)
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; K00018 glycerate dehydrogenase [EC:1.1.1.29] rbh
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IA3_DECAR rbh
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein {ECO:0000313|EMBL:AAZ45428.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_18
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19701..20345
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IA2_DECAR
hypothetical protein; K00782 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ45429.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_19
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20354..22840)
DNA (2487bp) protein (829aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IA0_DECAR rbh
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) rbh
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:AAZ45431.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_20
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23080..23295
DNA (216bp) protein (72aa)
RNA-binding S4 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47I99_DECAR
RNA-binding S4; K14761 ribosome-associated protein
RNA-binding S4 {ECO:0000313|EMBL:AAZ45432.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_21
unknown

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comp(23307..23549)
DNA (243bp) protein (81aa)

This feature has no annotations

bjp_ig2103_scaffold_73_curated_22
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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23745..24605
DNA (861bp) protein (287aa)
Prolyl oligopeptidase family protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJI2_AZOSU rbh
prolyl oligopeptidase family protein rbh
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:AEV25407.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
bjp_ig2103_scaffold_73_curated_23
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24659..26071)
DNA (1413bp) protein (471aa)
4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47I94_DECAR rbh
4Fe-4S ferredoxin rbh
4Fe-4S ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:AAZ45437.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_24
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26420..27754
DNA (1335bp) protein (445aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47I93_DECAR rbh
Fis family transcriptional regulator rbh
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:AAZ45438.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_73_curated_25
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27783..28487)
DNA (705bp) protein (235aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] rbh
ABC transporter n=1 Tax=Thauera phenylacetica B4P RepID=N6ZWX8_9RHOO rbh
bjp_ig2103_scaffold_73_curated_26
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28480..29706)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6X134_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:ENO75306.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
hypothetical protein; K09808 lipoprotein-releasing system permease protein rbh
bjp_ig2103_scaffold_73_curated_27
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29708..30940)
DNA (1233bp) protein (411aa)
RND family efflux transporter MFP subunit n=1 Tax=Thauera sp. 63 RepID=N6XYK2_9RHOO rbh
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:ENO75307.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein rbh
bjp_ig2103_scaffold_73_curated_28
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31092..32063
DNA (972bp) protein (324aa)
Bile acid:sodium symporter n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZLZ7_THASP rbh
sodium symporter rbh
Bile acid:sodium symporter {ECO:0000313|EMBL:ACK54052.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
bjp_ig2103_scaffold_73_curated_29
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(32223..32777)
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas mendocina RepID=B3SPW8_PSEME
Putative uncharacterized protein {ECO:0000313|EMBL:ABV54372.1}; TaxID=300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina.;"
Displaying items 1-30 of 143 in total

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