ggKbase home page

DS1215_scaffold_27

Alias: DS1215_Halomonas_54_144_21

Search features with annotation key words

Displaying items 1-30 of 51 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DS1215_scaffold_27_1
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..298
DNA (297bp) protein (99aa)
Electron transfer flavoprotein subunit alpha n=7 Tax=Halomonas RepID=G9EI91_9GAMM
electron transfer flavoprotein subunit alpha Tax=DS1215_Halomonas_54_146
electron transfer flavoprotein subunit beta
DS1215_scaffold_27_2
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(440..928)
DNA (489bp) protein (163aa)
Anti-RNA polymerase sigma 70 factor n=3 Tax=Halomonas RepID=G4F5S7_9GAMM
anti-RNA polymerase sigma 70 factor; K07740 regulator of sigma D Tax=DS1215_Halomonas_54_146
regulator of RpoD, Rsd/AlgQ
DS1215_scaffold_27_3
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1248..2390
DNA (1143bp) protein (381aa)
Extracellular ligand-binding receptor n=3 Tax=Halomonas RepID=L9U7V0_9GAMM
livB; Leu/Ile/Val-binding protein-like protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=DS1215_Halomonas_54_146
hypothetical protein
DS1215_scaffold_27_4
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2454..3374
DNA (921bp) protein (307aa)
Inner-membrane translocator n=3 Tax=Halomonas RepID=G4F5S9_9GAMM
branched-chain amino acid transport system permease Tax=DS1215_Halomonas_54_146
ABC-type transporter, integral membrane subunit rbh
DS1215_scaffold_27_5
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3367..4431
DNA (1065bp) protein (355aa)
High-affinity branched-chain amino acid transport system permease protein BraE n=2 Tax=Halomonas RepID=G9EHI4_9GAMM
livM; High-affinity branched-chain amino acid transport system permease protein LivM (LIV-I protein M); K01998 branched-chain amino acid transport system permease protein Tax=DS1215_Halomonas_54_146
ABC-type transporter, integral membrane subunit
DS1215_scaffold_27_6
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4424..5176
DNA (753bp) protein (251aa)
Monosaccharide-transporting ATPase (EC:3.6.3.17)
ABC transporter related protein n=2 Tax=Halomonas RepID=G4F5T1_9GAMM
livG; High-affinity branched-chain amino acid transport ATP-binding protein LivG (LIV-I protein G); K01995 branched-chain amino acid transport system ATP-binding protein Tax=DS1215_Halomonas_54_146
DS1215_scaffold_27_7
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5169..5849
DNA (681bp) protein (227aa)
Monosaccharide-transporting ATPase (EC:3.6.3.17)
High-affinity branched-chain amino acid transport ATP-binding protein LivF n=1 Tax=Halomonas boliviensis LC1 RepID=G9EHI2_9GAMM
livF; High-affinity branched-chain amino acid transport ATP-binding protein LivF (LIV-I protein F); K01996 branched-chain amino acid transport system ATP-binding protein Tax=DS1215_Halomonas_54_146
DS1215_scaffold_27_8
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5854..6768)
DNA (915bp) protein (305aa)
arylformamidase (EC:3.5.1.9) Tax=DS1215_Halomonas_54_146
Arylformamidase (EC:3.5.1.9)
Putative arylformamidase n=1 Tax=Halomonas boliviensis LC1 RepID=G9EHI1_9GAMM
DS1215_scaffold_27_9
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6953..7453)
DNA (501bp) protein (167aa)
Disulfide bond formation protein B n=3 Tax=Halomonas RepID=G4F5T4_9GAMM
dsbB; disulfide bond formation protein DsbB; K03611 disulfide bond formation protein DsbB Tax=DS1215_Halomonas_54_146
Disulfide bond formation protein B
DS1215_scaffold_27_10
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7450..9090)
DNA (1641bp) protein (547aa)
gshA; glutamate--cysteine ligase (EC:6.3.2.2); K01919 glutamate--cysteine ligase [EC:6.3.2.2] Tax=DS1215_Halomonas_54_146
Glutamate--cysteine ligase n=2 Tax=Halomonas RepID=G9EHH9_9GAMM
Glutamate--cysteine ligase
DS1215_scaffold_27_11
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9238..11577)
DNA (2340bp) protein (780aa)
Ribonuclease RNAse H n=1 Tax=Halomonas sp. HAL1 RepID=G4F5T6_9GAMM
tex; ribonuclease RNAse H; K06959 uncharacterized protein Tax=DS1215_Halomonas_54_146
Tex-like protein
DS1215_scaffold_27_12
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11801..13357)
DNA (1557bp) protein (519aa)
pckA; phosphoenolpyruvate carboxykinase (EC:4.1.1.49); K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] Tax=DS1215_Halomonas_54_146
Phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=5 Tax=Halomonas RepID=F7SJ39_9GAMM
DS1215_scaffold_27_13
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13754..14629)
DNA (876bp) protein (292aa)
33 kDa chaperonin n=3 Tax=Halomonas RepID=L9U609_9GAMM
hslO; HSP33-like chaperonin; K04083 molecular chaperone Hsp33 Tax=DS1215_Halomonas_54_146
33 kDa chaperonin
DS1215_scaffold_27_14
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14701..15090)
DNA (390bp) protein (130aa)
Heat shock protein 15 n=1 Tax=Halomonas sp. HAL1 RepID=G4FBN5_9GAMM
hslR; ribosome-associated heat shock protein Hsp15; K04762 ribosome-associated heat shock protein Hsp15 Tax=DS1215_Halomonas_54_146
RNA-binding S4 domain protein
DS1215_scaffold_27_15
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15087..15839)
DNA (753bp) protein (251aa)
Haloacid dehydrogenase n=3 Tax=Halomonas RepID=G4FBN4_9GAMM
haloacid dehydrogenase; K07025 putative hydrolase of the HAD superfamily Tax=DS1215_Halomonas_54_146
HAD-superfamily hydrolase, subfamily IA, variant 3
DS1215_scaffold_27_16
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15854..16504
DNA (651bp) protein (217aa)
nudE; ADP-ribose diphosphatase NudE (EC:3.6.1.-); K08312 ADP-ribose diphosphatase [EC:3.6.1.-] Tax=DS1215_Halomonas_54_146
Adenosine nucleotide hydrolase NudE n=2 Tax=Halomonas RepID=G4FBN3_9GAMM
NUDIX hydrolase
DS1215_scaffold_27_17
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16609..18453)
DNA (1845bp) protein (615aa)
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=DS1215_Halomonas_54_146
Dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=7 Tax=Halomonas RepID=E1V800_HALED
DS1215_scaffold_27_18
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18875..19189
DNA (315bp) protein (105aa)
High-potential iron-sulfur protein n=1 Tax=Halomonas sp. GFAJ-1 RepID=H0IZY3_9GAMM
hip; high-potential iron-sulfur protein Tax=DS1215_Halomonas_54_146
High potential iron-sulfur protein
DS1215_scaffold_27_19
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19303..20865)
DNA (1563bp) protein (521aa)
SpoVR family protein n=3 Tax=Halomonas RepID=G4F9M0_9GAMM
ycgB; hypothetical protein Tax=DS1215_Halomonas_54_146
SpoVR family protein
DS1215_scaffold_27_20
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20890..22176)
DNA (1287bp) protein (429aa)
UPF0229 protein GME_02009 n=6 Tax=Halomonas RepID=F7SIU4_9GAMM
hypothetical protein; K09786 hypothetical protein Tax=DS1215_Halomonas_54_146
UPF0229 protein yeaH rbh
DS1215_scaffold_27_21
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22191..24113)
DNA (1923bp) protein (641aa)
K07180 serine protein kinase n=8 Tax=Halomonadaceae RepID=E1V7H9_HALED
putative serine protein kinase PrkA; K07180 serine protein kinase Tax=DS1215_Halomonas_54_146
putative serine protein kinase, PrkA
DS1215_scaffold_27_22
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24412..26433)
DNA (2022bp) protein (674aa)
fadH; 2,4-dienoyl-CoA reductase (EC:1.3.1.34); K00219 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] Tax=DS1215_Halomonas_54_146
2,4-dienoyl-CoA reductase (NADPH) (EC:1.3.1.34) rbh
Aldolase-type TIM barrel n=3 Tax=Halomonas RepID=L9U982_9GAMM
DS1215_scaffold_27_23
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26664..27578
DNA (915bp) protein (305aa)
Drug/metabolite transporter n=5 Tax=Halomonas RepID=L9U8F2_9GAMM
hypothetical protein Tax=DS1215_Halomonas_54_146
protein of unknown function DUF6 transmembrane
DS1215_scaffold_27_24
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27621..29189
DNA (1569bp) protein (523aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=5 Tax=Halomonas RepID=F7SIT9_9GAMM
yhcX; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=DS1215_Halomonas_54_146
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
DS1215_scaffold_27_25
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29350..29649)
DNA (300bp) protein (100aa)
Alkyltransferase-like protein 1 n=1 Tax=Halomonas boliviensis LC1 RepID=G9EDG9_9GAMM
methylated-DNA--protein-cysteine methyltransferase Tax=DS1215_Halomonas_54_146
Methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein
DS1215_scaffold_27_26
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29693..30301)
DNA (609bp) protein (203aa)
azoR; (acyl-carrier protein) phosphodiesterase (EC:1.7.-.-); K01118 FMN-dependent NADH-azoreductase [EC:1.7.-.-] Tax=DS1215_Halomonas_54_146
FMN-dependent NADH-azoreductase n=2 Tax=Halomonas RepID=G9EDH0_9GAMM
FMN-dependent NADH-azoreductase
DS1215_scaffold_27_27
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30436..32682)
DNA (2247bp) protein (749aa)
Glycosyl transferase, group 1 n=2 Tax=Halomonas RepID=G4F9K7_9GAMM
group 1 glycosyl transferase Tax=DS1215_Halomonas_54_146
glycosyl transferase group 1
DS1215_scaffold_27_28
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33023..33559
DNA (537bp) protein (179aa)
Outer membrane lipoprotein Blc n=1 Tax=Halomonas sp. HAL1 RepID=G4F9K5_9GAMM
Lipocalin-like protein; K03098 outer membrane lipoprotein Blc Tax=DS1215_Halomonas_54_146
Lipocalin/cytosolic fatty-acid binding protein domain
DS1215_scaffold_27_29
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33577..34653
DNA (1077bp) protein (359aa)
yeaU; tartrate dehydrogenase (EC:4.1.1.73); K07246 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] Tax=DS1215_Halomonas_54_146
tartrate dehydrogenase (EC:4.1.1.73)
D-malate dehydrogenase n=5 Tax=Halomonas RepID=G9EDI1_9GAMM
DS1215_scaffold_27_30
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34729..35328)
DNA (600bp) protein (200aa)
NAD(P)H dehydrogenase (quinone) n=5 Tax=Halomonas RepID=L9U8E2_9GAMM
wrbA; flavoprotein wrbA; K03809 Trp repressor binding protein Tax=DS1215_Halomonas_54_146
Flavoprotein wrbA
Displaying items 1-30 of 51 in total

View Taxonomy