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RBG_16_scaffold_34276_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_34276_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..857)
DNA (855bp) protein (285aa)
fabF2; 3-oxoacyl-ACP synthase (EC:2.3.1.179 2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] rbh
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=3030333 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_34276_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(932..1168)
DNA (237bp) protein (79aa)
Acyl carrier protein id=3030330 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=Pasteurellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
acpP; acyl carrier protein; K02078 acyl carrier protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_34276_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1354..2094)
DNA (741bp) protein (247aa)
3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] rbh
3-oxoacyl-(Acyl-carrier-protein) reductase id=3030327 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_34276_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2167..3135)
DNA (969bp) protein (323aa)
fabD; malonyl CoA-ACP transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] rbh
Malonyl CoA-acyl carrier protein transacylase id=3030323 bin=GWC2_Deltaproteobacteria_42_51 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_34276_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4768..4998
DNA (231bp) protein (77aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_34276_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5268..5453)
DNA (186bp) protein (62aa)
50S ribosomal protein L32 id=4841626 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_34276_curated_7
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5486..6016)
DNA (531bp) protein (177aa)
Putative uncharacterized protein id=3030315 bin=GWC2_Deltaproteobacteria_42_51 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein; K07040 uncharacterized protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_34276_curated_8
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8573..8734
DNA (162bp) protein (54aa)
Uncharacterized protein id=4074198 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_34276_curated_9
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8810..10126
DNA (1317bp) protein (439aa)
carboxyl-terminal protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] rbh
Periplasmic carboxy-terminal processing protease id=4074200 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_34276_curated_10
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10356..11294
DNA (939bp) protein (313aa)
Putative uncharacterized protein id=4074271 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
hypothetical protein; K09798 hypothetical protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_34276_curated_11
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12353..12475
DNA (123bp) protein (41aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Displaying 11 items

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