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RBG_16_scaffold_26467_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_26467_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..2624)
DNA (2622bp) protein (874aa)
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit beta id=3619740 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_26467_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2713..3096)
DNA (384bp) protein (128aa)
50S ribosomal protein L7/L12 id=3619739 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
rplL; ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_26467_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3151..3552)
DNA (402bp) protein (134aa)
Ribosomal protein L10 id=3619601 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_26467_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3984..4664)
DNA (681bp) protein (227aa)
50S ribosomal protein L1 id=4674044 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
rplA; ribosomal protein L1; K02863 large subunit ribosomal protein L1 rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_26467_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4719..5141)
DNA (423bp) protein (141aa)
50S ribosomal protein L11 id=4674074 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
rplK; ribosomal protein L11; K02867 large subunit ribosomal protein L11
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_26467_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5256..5777)
DNA (522bp) protein (174aa)
Transcription antitermination protein nusG id=3619589 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
nusG; transcription termination/antitermination factor NusG; K02601 transcriptional antiterminator NusG
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_26467_curated_7
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5783..5968)
DNA (186bp) protein (62aa)
Preprotein translocase, SecE subunit id=4674078 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_26467_curated_8
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6136..6288)
DNA (153bp) protein (51aa)
50S ribosomal protein L33 n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E913_FLESM
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_26467_curated_9
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6359..7558)
DNA (1200bp) protein (400aa)
Elongation factor Tu n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YFW5_THEYD rbh
tuf2; elongation factor Tu rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Displaying 9 items

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