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RBG_16_scaffold_129246_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_129246_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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100..867
DNA (768bp) protein (256aa)
Putative uncharacterized protein id=2546146 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Thermus sp. CCB_US3_UF1 genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_129246_curated_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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957..1280
DNA (324bp) protein (108aa)
Putative uncharacterized protein id=2546146 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Thermus sp. CCB_US3_UF1 genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
histidine kinase
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_129246_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1281..1400
DNA (120bp) protein (40aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_129246_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1565..2464)
DNA (900bp) protein (300aa)
Metalloprotease id=3548108 bin=GWC2_Deltaproteobacteria_42_51 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
metalloprotease rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_129246_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2542..2817
DNA (276bp) protein (92aa)
Appr-1-p histone processing protein id=3548105 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
appr-1-p histone processing protein
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_129246_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2849..3001)
DNA (153bp) protein (51aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_129246_curated_7
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2991..3170)
DNA (180bp) protein (60aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_129246_curated_8
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3269..4114
DNA (846bp) protein (282aa)
methylisocitrate lyase (EC:2.7.8.23); K01003 carboxyvinyl-carboxyphosphonate phosphorylmutase [EC:2.7.8.23] rbh
Methylisocitrate lyase id=3548103 bin=GWC2_Deltaproteobacteria_42_51 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_129246_curated_9
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4384..4731)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y4A9_9BACT
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_129246_curated_10
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4979..5074
DNA (96bp) protein (32aa)
Acyl-CoA dehydrogenase domain protein id=3548101 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Displaying 10 items

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