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RBG_16_scaffold_6027_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_6027_curated_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..93)
DNA (93bp) protein (31aa)
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshD (Pilus type IV) id=4128012 bin=GWF2_Nitrospirae_44_13 species=Pseudoalteromonas haloplanktis genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
mannose-sensitive agglutinin biogenesis protein MshD
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_6027_curated_2
unknown

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224..781
DNA (558bp) protein (186aa)

This feature has no annotations

RBG_16_scaffold_6027_curated_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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921..1385
DNA (465bp) protein (155aa)
Putative uncharacterized protein id=4128013 bin=GWF2_Nitrospirae_44_13 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_6027_curated_4
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1398..3290
DNA (1893bp) protein (631aa)
hypothetical protein id=3008 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_6027_curated_5
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3378..4511)
DNA (1134bp) protein (378aa)
aminopeptidase; K01269 aminopeptidase [EC:3.4.11.-] rbh
Aminopeptidase id=3721234 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_6027_curated_6
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4514..5908)
DNA (1395bp) protein (465aa)
Type IV pilus secretin PilQ id=3721230 bin=GWF2_Nitrospirae_44_13 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
type II and III secretion system protein, secretin; K02666 type IV pilus assembly protein PilQ
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_6027_curated_7
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5905..6081)
DNA (177bp) protein (59aa)
id=3721229 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_6027_curated_8
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6429..6977)
DNA (549bp) protein (183aa)
id=3721227 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_6027_curated_9
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7005..7511)
DNA (507bp) protein (169aa)
id=3721225 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_6027_curated_10
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7508..8494)
DNA (987bp) protein (329aa)
Type IV pilus assembly protein PilM id=3721222 bin=GWF2_Nitrospirae_44_13 species=unknown genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_6027_curated_11
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8494..8724)
DNA (231bp) protein (77aa)
id=3721221 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_6027_curated_12
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9323..9457)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z7T7_BELBD id=5103540 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_6027_curated_13
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9470..10066)
DNA (597bp) protein (199aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1I0_DEHLB
EmrB/QacA subfamily drug resistance transporter
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_6027_curated_14
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10432..10551
DNA (120bp) protein (40aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_6027_curated_15
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10639..10824
DNA (186bp) protein (62aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
RBG_16_scaffold_6027_curated_16
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11323..11601)
DNA (279bp) protein (93aa)
Transcriptional regulator, AbrB family id=4854863 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Displaying 16 items

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