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rifoxyb2_full_scaffold_13110_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb2_full_scaffold_13110_curated_1
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..176
DNA (174bp) protein (58aa)
Ribosome maturation factor RimM id=2146342 bin=GWB2_Deltaproteobacteria_65_81 species=Citreicella sp. SE45 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_13110_curated_2
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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190..882
DNA (693bp) protein (231aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
tRNA (guanine-N(1)-)-methyltransferase id=2146340 bin=GWB2_Deltaproteobacteria_65_81 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good + rbh
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_13110_curated_3
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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949..1401
DNA (453bp) protein (151aa)
50S ribosomal protein L19 id=2274510 bin=GWA2_Deltaproteo_65_63 species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
ribosomal protein L19; K02884 large subunit ribosomal protein L19
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_13110_curated_4
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1502..2002
DNA (501bp) protein (167aa)
rnhB; ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4]
Ribonuclease HII id=2274509 bin=GWA2_Deltaproteo_65_63 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_13110_curated_5
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1999..2388
DNA (390bp) protein (130aa)
Uncharacterized protein id=2274508 bin=GWA2_Deltaproteo_65_63 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein; K07460 putative endonuclease
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_13110_curated_6
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2594..2932
DNA (339bp) protein (113aa)
GAF sensor signal transduction histidine kinase id=2937401 bin=GWA2_Elusi_like_61_42 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
Displaying 6 items

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