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rifoxyb2_full_scaffold_8752_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb2_full_scaffold_8752_curated_1
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..255)
-----------------
DNA (255bp)
protein (85aa)
Type II secretion system F domain protein id=1718227 bin=GWB2_Deltaproteobacteria_65_81 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_8752_curated_2
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(269..1624)
-----------------
DNA (1356bp)
protein (452aa)
Type II secretion system protein E id=1718228 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good + rbh
type II secretion system protein E; K02283 pilus assembly protein CpaF rbh
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_8752_curated_3
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1621..2448)
-----------------
DNA (828bp)
protein (276aa)
Response regulator receiver protein id=1718229 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good + rbh
response regulator receiver protein; K02282 pilus assembly protein CpaE
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_8752_curated_4
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2657..2884
-----------------
DNA (228bp)
protein (76aa)
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_8752_curated_5
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2818..3933)
-----------------
DNA (1116bp)
protein (372aa)
Putative uncharacterized protein id=1718230 bin=GWB2_Deltaproteobacteria_65_81 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good + rbh
hypothetical protein
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_8752_curated_6
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3965..4330)
-----------------
DNA (366bp)
protein (122aa)
Pilus assembly protein id=5007834 bin=GWA2_Deltaproteo_65_63 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
type II/III secretion system protein; K02280 pilus assembly protein CpaC
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_8752_curated_7
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4420..5022
-----------------
DNA (603bp)
protein (201aa)
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_8752_curated_8
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5023..5166
-----------------
DNA (144bp)
protein (48aa)
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_8752_curated_9
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5331..5564)
-----------------
DNA (234bp)
protein (78aa)
Flp pilus assembly protein CpaB id=1718232 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_8752_curated_10
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6232..6720)
-----------------
DNA (489bp)
protein (163aa)
TadE family protein id=1718233 bin=GWB2_Deltaproteobacteria_65_81 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
TadE family protein
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_8752_curated_11
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6721..6894)
-----------------
DNA (174bp)
protein (58aa)
hypothetical protein id=1718234 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_8752_curated_12
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6922..7104)
-----------------
DNA (183bp)
protein (61aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI000360A63D
Flp/Fap pilin component; K02651 pilus assembly protein Flp/PilA
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
Displaying 12 items

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