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RBG_13_scaffold_46457_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_scaffold_46457_curated_1
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

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2..283
DNA (282bp) protein (94aa)
50S ribosomal protein L22 id=3868572 bin=GWC2_OP3_44_8 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
Tax=RBG_13_WOR-2_44_8b_curated
RBG_13_scaffold_46457_curated_2
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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295..978
DNA (684bp) protein (228aa)
30S ribosomal protein S3 id=2173676 bin=GWB2_CP_45_9 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3 rbh
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_46457_curated_3
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(877..1218)
DNA (342bp) protein (114aa)
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_46457_curated_4
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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1413..1616
DNA (204bp) protein (68aa)
50S ribosomal protein L29 id=2173670 bin=GWB2_CP_45_9 species=Carnobacterium maltaromaticum genus=Carnobacterium taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_46457_curated_5
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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1609..1884
DNA (276bp) protein (92aa)
30S ribosomal protein S17 n=2 Tax=Caldanaerobacter subterraneus RepID=RS17_THETN
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_46457_curated_6
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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1884..2252
DNA (369bp) protein (123aa)
50S ribosomal protein L14 id=4219000 bin=GWF2_OP3_43_52 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_46457_curated_7
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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2500..2643
DNA (144bp) protein (48aa)
50S ribosomal protein L24 id=3868634 bin=GWC2_OP3_44_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_46457_curated_8
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(2582..2980)
DNA (399bp) protein (133aa)
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_46457_curated_9
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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4154..4516
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W401_DESAS
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_46457_curated_10
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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4520..5071
DNA (552bp) protein (184aa)
30S ribosomal protein S5 id=4219013 bin=GWF2_OP3_43_52 species=Oscillibacter valericigenes genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_46457_curated_11
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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5112..5513
DNA (402bp) protein (134aa)
50S ribosomal protein L15 id=2002108 bin=GWB2_CP_45_9 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_46457_curated_12
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(5589..5720)
DNA (132bp) protein (44aa)
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_46457_curated_13
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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5773..6192
DNA (420bp) protein (140aa)
Protein translocase subunit SecY id=4219017 bin=GWF2_OP3_43_52 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY
Tax=RBG_13_WOR_2_44_8_curated
Displaying 13 items

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