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RBG_13_scaffold_6001_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_scaffold_6001_curated_1
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(1..291)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI0003676CB4
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_2
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(557..769)
DNA (213bp) protein (71aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_3
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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881..1147
DNA (267bp) protein (89aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2ALA0_9BACT
phosphodiesterase; K06950 uncharacterized protein
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_4
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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1210..1482
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZNW1_9BACT
DNA-binding protein HU 1; K03530 DNA-binding protein HU-beta
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_5
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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1551..1751
DNA (201bp) protein (67aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_6
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(2063..2275)
DNA (213bp) protein (71aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_7
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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2850..3500
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I5V6_9BACL id=5086684 bin=GWF1_OP11_31_35_complete species=Paenibacillus curdlanolyticus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
hypothetical protein
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_8
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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3490..4281
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A8M3_9BACT
hypothetical protein; K01992 ABC-2 type transport system permease protein
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_9
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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4303..5367
DNA (1065bp) protein (355aa)
GTP-binding protein YchF id=1909883 bin=GWE2_CPR3_35_7 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good rbh
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 rbh
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_10
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

5374..5574
DNA (201bp) protein (67aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_11
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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5592..5807
DNA (216bp) protein (72aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_12
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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5820..6722
DNA (903bp) protein (301aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] id=67129 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75]
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_13
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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6719..7711
DNA (993bp) protein (331aa)
hypothetical protein id=15191762 bin=GWC1_OP11_49_16_COMPLETE species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
hypothetical protein
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_14
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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8352..8717
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI0003623B9F
hypothetical protein
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_15
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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8714..9967
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA255-J07 RepID=UPI00036AD155 rbh
hypothetical protein
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_16
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

9945..10526
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FVL8_9BACT
DNA polymerase beta domain-containing protein
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_17
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

10526..10726
DNA (201bp) protein (67aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_18
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

10739..12073
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI0003818C4F rbh
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_6001_curated_19
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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12075..12557
DNA (483bp) protein (161aa)
secF; protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF id=14423799 bin=bin11_novelCP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin11_novelCP organism_group=Unknown_CP
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
Displaying 19 items

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