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RBG_13_OP3_44_8_RBG_13_scaffold_2706

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_2706_1
unknown

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1..231
DNA (231bp) protein (77aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_2706_2
unknown

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255..1073
DNA (819bp) protein (273aa)
Alpha/beta hydrolase fold containing protein id=3984338 bin=GWF2_OP3_43_52 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein; K06889
RBG_13_OP3_44_8_RBG_13_scaffold_2706_3
unknown

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1256..1639
DNA (384bp) protein (128aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_2706_4

Not on your lists

1665..2168
DNA (504bp) protein (168aa)
RNA 3'-terminal phosphate cyclase (EC:6.5.1.4); K01974 RNA 3'-terminal phosphate cyclase [EC:6.5.1.4]
RNA 3'-terminal phosphate cyclase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWJ0_SYNAS
Marine sediment metagenome DNA, contig: S03H2_L02918 {ECO:0000313|EMBL:GAH35160.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RBG_13_OP3_44_8_RBG_13_scaffold_2706_5

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2134..2712
DNA (579bp) protein (193aa)
RNA-3'-phosphate cyclase (EC:6.5.1.4); K01974 RNA 3'-terminal phosphate cyclase [EC:6.5.1.4]
RNA-3'-phosphate cyclase n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I439_DESAP
Marine sediment metagenome DNA, contig: S12H4_C02215 {ECO:0000313|EMBL:GAI69018.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RBG_13_OP3_44_8_RBG_13_scaffold_2706_6
unknown

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2816..3622
DNA (807bp) protein (269aa)
NAD-dependent deacetylase; K12410 NAD-dependent deacetylase [EC:3.5.1.-]
Silent information regulator protein Sir2 id=4046336 bin=GWF2_Planctomycetes_50_10 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
RBG_13_OP3_44_8_RBG_13_scaffold_2706_7

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3952..4188
DNA (237bp) protein (79aa)
Nitroreductase n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WLT3_METH6
Marine sediment metagenome DNA, contig: S06H3_S20077 {ECO:0000313|EMBL:GAI48727.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Nitroreductase
RBG_13_OP3_44_8_RBG_13_scaffold_2706_8

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4181..4624
DNA (444bp) protein (148aa)
Flavodoxin n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LW80_SYNAS
Marine sediment metagenome DNA, contig: S03H2_S02543 {ECO:0000313|EMBL:GAH61512.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
flavodoxin
RBG_13_OP3_44_8_RBG_13_scaffold_2706_9

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4621..5019
DNA (399bp) protein (133aa)
Marine sediment metagenome DNA, contig: S01H1_C00084 {ECO:0000313|EMBL:GAF71542.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein; K09143 hypothetical protein id=14430173 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein; K09143 hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_2706_10
unknown

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5306..5614
DNA (309bp) protein (103aa)
Putative uncharacterized protein id=4556790 bin=GWA2_OP3_53_43 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RBG_13_OP3_44_8_RBG_13_scaffold_2706_11
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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5607..6305
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q5E7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EIG55003.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_2706_12
unknown

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6522..6851
DNA (330bp) protein (110aa)
Putative uncharacterized protein id=4211587 bin=GWC2_OP3-like_45_7 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_2706_13
unknown

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6856..7140
DNA (285bp) protein (95aa)
id=4211588 bin=GWC2_OP3-like_45_7 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
RBG_13_OP3_44_8_RBG_13_scaffold_2706_14
candidate division Zixibacteria, Bacteria

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7351..8385
DNA (1035bp) protein (345aa)
pesticidal protein Cry7Aa n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B345DE
Uncharacterized protein {ECO:0000313|EMBL:EQB64143.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
glycosidase-like protein
RBG_13_OP3_44_8_RBG_13_scaffold_2706_15
unknown

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8382..10616
DNA (2235bp) protein (745aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4BCB6
group 1 glycosyl transferase
RBG_13_OP3_44_8_RBG_13_scaffold_2706_16

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10954..11424
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Medicago truncatula RepID=I3SNY2_MEDTR
Marine sediment metagenome DNA, contig: S06H3_S08632 {ECO:0000313|EMBL:GAI28223.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RBG_13_OP3_44_8_RBG_13_scaffold_2706_17

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11421..12593
DNA (1173bp) protein (391aa)
Sodium/hydrogen exchanger n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJN3_CELLD
Marine sediment metagenome DNA, contig: S01H4_S02398 {ECO:0000313|EMBL:GAG78800.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sodium/hydrogen exchanger
RBG_13_OP3_44_8_RBG_13_scaffold_2706_18

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12623..13003
DNA (381bp) protein (127aa)
Marine sediment metagenome DNA, contig: S01H1_S04023 {ECO:0000313|EMBL:GAF85925.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein FdumT_02058 id=4225911 bin=GWC2_Alphaproteobacteria_42_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_2706_19
unknown

Not on your lists

13177..14172
DNA (996bp) protein (332aa)
HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-]
Band 7 protein, HflK protein id=2099120 bin=GWB2_CP_45_9 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RBG_13_OP3_44_8_RBG_13_scaffold_2706_20
unknown

Not on your lists

14169..15125
DNA (957bp) protein (319aa)
HflC protein; K04087 membrane protease subunit HflC [EC:3.4.-.-]
Band 7 protein, HflC protein id=2099118 bin=GWB2_CP_45_9 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RBG_13_OP3_44_8_RBG_13_scaffold_2706_21
unknown

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15338..16390
DNA (1053bp) protein (351aa)
Transporter, MscS family id=2099122 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
MscS mechanosensitive ion channel family protein
RBG_13_OP3_44_8_RBG_13_scaffold_2706_22
unknown

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16398..16589
DNA (192bp) protein (64aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_2706_23
unknown

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16586..17260
DNA (675bp) protein (225aa)
Uncharacterized protein id=2527160 bin=GWC2_OP3-like_45_7 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_2706_24
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17241..17984
DNA (744bp) protein (248aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B59DF8
LysM domain protein {ECO:0000313|EMBL:EDY82050.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
RBG_13_OP3_44_8_RBG_13_scaffold_2706_25
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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17992..18642
DNA (651bp) protein (217aa)
Putative peptidoglycan-binding domain-containing protein n=1 Tax=Moorea producens 3L RepID=F4XWM6_9CYAN
Putative peptidoglycan-binding domain-containing protein {ECO:0000313|EMBL:EGJ30986.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
peptidoglycan-binding protein
RBG_13_OP3_44_8_RBG_13_scaffold_2706_26
unknown

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18756..18956
DNA (201bp) protein (67aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_2706_27
unknown

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19145..20068
DNA (924bp) protein (308aa)
beta-lactamase; K01467 beta-lactamase [EC:3.5.2.6]
Beta-lactamase id=2883408 bin=GWF2_OP3_43_52 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_2706_28
unknown

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20083..20754
DNA (672bp) protein (224aa)
Putative chemotaxis protein id=2883407 bin=GWF2_OP3_43_52 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
chemotaxis protein; K02557 chemotaxis protein MotB
RBG_13_OP3_44_8_RBG_13_scaffold_2706_29
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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20819..21757
DNA (939bp) protein (313aa)
Hexose kinase, 1-phosphofructokinase family n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVY2_METHD
hexose kinase, 1-phosphofructokinase family
Hexose kinase, 1-phosphofructokinase family {ECO:0000313|EMBL:AGB48830.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RBG_13_OP3_44_8_RBG_13_scaffold_2706_30
unknown

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comp(22122..22325)
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying 30 items

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