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RBG_13_OP3_44_8_RBG_13_scaffold_1776

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_1776_1
unknown

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3..245
DNA (243bp) protein (81aa)
Electron transport complex, RnfABCDGE type, B subunit n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECT2_9CLOT
RnfABCDGE type electron transport complex subunit B
RBG_13_OP3_44_8_RBG_13_scaffold_1776_2
unknown

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256..861
DNA (606bp) protein (202aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
Phosphoribosylglycinamide formyltransferase id=3707669 bin=GWC2_OP3_44_8 species=Bacillus azotoformans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RBG_13_OP3_44_8_RBG_13_scaffold_1776_3
unknown

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comp(851..1741)
DNA (891bp) protein (297aa)
id=2849910 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_1776_4
unknown

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comp(1689..3371)
DNA (1683bp) protein (561aa)
Metallo-protease FtsH id=2849908 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
metallo-protease FtsH
RBG_13_OP3_44_8_RBG_13_scaffold_1776_5
unknown

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3618..3896
DNA (279bp) protein (93aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_1776_6
unknown

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3978..5243
DNA (1266bp) protein (422aa)
eno; phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11]
Enolase id=4832873 bin=GWC2_OP3_44_8 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RBG_13_OP3_44_8_RBG_13_scaffold_1776_7
unknown

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5243..5524
DNA (282bp) protein (94aa)
Septum formation initiator id=2849904 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_1776_8
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

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5696..6859
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KBR4_ELUMP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC97751.1}; TaxID=445932 species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
RBG_13_OP3_44_8_RBG_13_scaffold_1776_9
unknown

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6859..7299
DNA (441bp) protein (147aa)
hypothetical protein id=8265759 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_1776_10
unknown

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7351..8310
DNA (960bp) protein (320aa)
protease htpX; K03799 heat shock protein HtpX [EC:3.4.24.-]
Protease HtpX homolog id=4716627 bin=GWA2_OP3_53_43 species=Methanobrevibacter ruminantium genus=Methanobrevibacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RBG_13_OP3_44_8_RBG_13_scaffold_1776_11
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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9730..9846
DNA (117bp) protein (39aa)
lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
Lysine--tRNA ligase n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I0Z8_DESAP
RBG_13_OP3_44_8_RBG_13_scaffold_1776_12
unknown

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9843..11033
DNA (1191bp) protein (397aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family id=2212711 bin=GWB2_CP_45_9 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
lipoprotein releasing system transmembrane protein LolC/E family; K09808 lipoprotein-releasing system permease protein
RBG_13_OP3_44_8_RBG_13_scaffold_1776_13
unknown

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11034..11711
DNA (678bp) protein (226aa)
lolD; ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
ABC transporter, ATP-binding protein id=2212710 bin=GWB2_CP_45_9 species=Sulfurihydrogenibium azorense genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RBG_13_OP3_44_8_RBG_13_scaffold_1776_14
unknown

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11733..12602
DNA (870bp) protein (290aa)
branched chain amino acid aminotransferase apoenzyme; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42]
Branched chain amino acid aminotransferase apoenzyme id=2212709 bin=GWB2_CP_45_9 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RBG_13_OP3_44_8_RBG_13_scaffold_1776_15
unknown

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12604..13110
DNA (507bp) protein (169aa)
UvrB/UvrC protein id=2212708 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
UVR domain-containing protein
RBG_13_OP3_44_8_RBG_13_scaffold_1776_16
unknown

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13097..14146
DNA (1050bp) protein (350aa)
Arginine kinase (EC:2.7.3.3); K00934 arginine kinase [EC:2.7.3.3]
Putative ATP:guanido phosphotransferase kuste3072 id=4012235 bin=GWF2_OP3_43_52 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_1776_17
unknown

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14163..16370
DNA (2208bp) protein (736aa)
ATPase AAA-2 domain protein id=4012237 bin=GWF2_OP3_43_52 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ATPase AAA; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC
RBG_13_OP3_44_8_RBG_13_scaffold_1776_18
unknown

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16370..17152
DNA (783bp) protein (261aa)
organic solvents resistance ABC transporter (EC:3.2.2.9); K02066 putative ABC transport system permease protein
ABC-type transport system id=4012240 bin=GWF2_OP3_43_52 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_1776_19
unknown

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17498..18028
DNA (531bp) protein (177aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
Ribonucleotide ABC transporter ATP-binding protein id=4012242 bin=GWF2_OP3_43_52 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_1776_20
unknown

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18245..18877
DNA (633bp) protein (211aa)
Protein containing Mammalian cell entry related domain id=4012244 bin=GWF2_OP3_43_52 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
mce-related protein
RBG_13_OP3_44_8_RBG_13_scaffold_1776_21
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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19407..19751
DNA (345bp) protein (115aa)
DNA repair protein radA n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J0X8_DESRM
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
Displaying 21 items

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