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RBG_13_OP3_44_8_RBG_13_scaffold_11584

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_11584_1
unknown

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3..122
DNA (120bp) protein (40aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_11584_2
unknown

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125..511
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037969DA
RBG_13_OP3_44_8_RBG_13_scaffold_11584_3

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511..978
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YY37_9BACT
Marine sediment metagenome DNA, contig: S01H1_L00444 {ECO:0000313|EMBL:GAF83564.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RBG_13_OP3_44_8_RBG_13_scaffold_11584_4

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994..1878
DNA (885bp) protein (295aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=uncultured bacterium RepID=K1ZHU9_9BACT
Marine sediment metagenome DNA, contig: S01H1_L00444 {ECO:0000313|EMBL:GAF83566.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_11584_5
unknown

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1951..2289
DNA (339bp) protein (113aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_11584_6
unknown

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2563..2763
DNA (201bp) protein (67aa)
Cold shock protein CspA id=4185583 bin=GWF2_OP3_43_52 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
CspC; cold shock proteins; K03704 cold shock protein (beta-ribbon, CspA family)
RBG_13_OP3_44_8_RBG_13_scaffold_11584_7
unknown

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comp(2814..2999)
DNA (186bp) protein (62aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_11584_8
unknown

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3602..4432
DNA (831bp) protein (277aa)
Putative cobalamin B12-binding/Radical SAM family protein id=4075963 bin=GWC2_Deltaproteobacteria_56_8 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
radical SAM protein
RBG_13_OP3_44_8_RBG_13_scaffold_11584_9
unknown

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comp(4370..4495)
DNA (126bp) protein (42aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_11584_10
unknown

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4516..4914
DNA (399bp) protein (133aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_11584_11

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4887..5666
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI0003666E72
Marine sediment metagenome DNA, contig: S03H2_S22418 {ECO:0000313|EMBL:GAH88603.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
methyltransferase type 11
RBG_13_OP3_44_8_RBG_13_scaffold_11584_12

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5663..6514
DNA (852bp) protein (284aa)
TPR repeats containing protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I5V3_METCZ
Marine sediment metagenome DNA, contig: S12H4_C00389 {ECO:0000313|EMBL:GAI63811.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_11584_13
unknown

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6604..6993
DNA (390bp) protein (130aa)
Putative uncharacterized protein id=2881214 bin=GWF2_OP3_43_52 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_11584_14
unknown

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7738..7974
DNA (237bp) protein (79aa)
ExsB family protein; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase (Glutamine-hydrolyzing) id=4722087 bin=GWC2_Deltaproteobacteria_66_88 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
RBG_13_OP3_44_8_RBG_13_scaffold_11584_15
unknown

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8041..8259
DNA (219bp) protein (73aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_11584_16

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8240..9856
DNA (1617bp) protein (539aa)
bchG; geranylgeranyl bacteriochlorophyll synthase; K04040 chlorophyll synthase [EC:2.5.1.62]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YTA8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD46295.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RBG_13_OP3_44_8_RBG_13_scaffold_11584_17
Dictyostelium purpureum, Dictyostelium, Dictyosteliida, Eukaryota

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9920..10582
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium purpureum RepID=F0ZAJ7_DICPU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGC39014.1}; TaxID=5786 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium purpureum (Slime mold).;"
RBG_13_OP3_44_8_RBG_13_scaffold_11584_18
Thermobaculum terrenum, Thermobaculum, Bacteria

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10961..11788
DNA (828bp) protein (276aa)
3-oxoacyl-(acyl-carrier-protein) synthase 2; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-(Acyl-carrier-protein) synthase 2 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBV0_THET1
3-oxoacyl-(Acyl-carrier-protein) synthase 2 {ECO:0000313|EMBL:ACZ42265.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
RBG_13_OP3_44_8_RBG_13_scaffold_11584_19
unknown

Not on your lists

11804..12181
DNA (378bp) protein (126aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Thioesterase superfamily protein id=3984580 bin=GWF2_OP3_43_52 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_11584_20

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12212..12712
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000361B57E
Marine sediment metagenome DNA, contig: S03H2_S19595 {ECO:0000313|EMBL:GAH87128.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nitroreductase
RBG_13_OP3_44_8_RBG_13_scaffold_11584_21
unknown

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12761..13192
DNA (432bp) protein (144aa)
50S ribosomal protein L13 id=4012370 bin=GWF2_OP3_43_52 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
RBG_13_OP3_44_8_RBG_13_scaffold_11584_22
unknown

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13199..13594
DNA (396bp) protein (132aa)
30S ribosomal protein S9 id=4012371 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
RBG_13_OP3_44_8_RBG_13_scaffold_11584_23
unknown

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13819..14841
DNA (1023bp) protein (341aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
N-acetyl-gamma-glutamyl-phosphate reductase id=4072676 bin=GWC2_OP3_44_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RBG_13_OP3_44_8_RBG_13_scaffold_11584_24
unknown

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comp(14697..15032)
DNA (336bp) protein (112aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_11584_25
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(15029..15817)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R643_9THEO
Putative uncharacterized protein {ECO:0000313|EMBL:EEB76562.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. pacificus DSM 12653.;"
RBG_13_OP3_44_8_RBG_13_scaffold_11584_26
unknown

Not on your lists

16080..16784
DNA (705bp) protein (235aa)
acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8]
Acetylglutamate kinase id=4012374 bin=GWF2_OP3_43_52 species=[Bacteroides] pectinophilus genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_11584_27
unknown

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17381..17785
DNA (405bp) protein (135aa)
acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11); K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
Acetylornithine aminotransferase id=4012375 bin=GWF2_OP3_43_52 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_11584_28
unknown

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17788..18711
DNA (924bp) protein (308aa)
ornithine carbamoyltransferase; K00611 ornithine carbamoyltransferase [EC:2.1.3.3]
Ornithine carbamoyltransferase id=4012376 bin=GWF2_OP3_43_52 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_11584_29
unknown

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19990..21303
DNA (1314bp) protein (438aa)
argH; argininosuccinate lyase ArgH (EC:4.3.2.1)
Argininosuccinate lyase id=3003471 bin=GWF2_OP3_38_59 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Displaying 29 items

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